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berkeley_reactor_200306_biofilm_scaffold_95231_170

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 174820..176067

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 416.0
  • Bit_score: 645
  • Evalue 3.40e-182
tyrosyl-tRNA synthetase (EC:6.1.1.1) similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 416.0
  • Bit_score: 623
  • Evalue 2.80e-176
Tyrosine--tRNA ligase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VM13_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 416.0
  • Bit_score: 623
  • Evalue 9.70e-176

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGACCAGGTTCACTTCCGACTTTCTGCGCATCCTCGACGAGCGCGGCTACATCCACCAGACCTCCGACCCGGAAGGGCTCGACGCGCTGGCGGCCAAGGGCGAGGTGGTCGGCTATATCGGCTTCGACTGCACCGCGCGCTCGCTGCATGCGGGCTCGCTGGTGCAGATCATGCTGCTGCACTGGCTGGAAAAGACCGGCAACAAGGTGATCGCCCTGATGGGCGGCGGCACCACGCGGGTCGGCGACCCCTCCGGCCGCGACGAGGCGCGCAAGCTCCTGTCCGTGGAGGACATCGAGGAGAACAAGCGGGCGATCCAGACCATCTTCGACCGTTTCCTCAGCTTCGGCCCTGGTCCGCGCGACGCGATCATGGTCGACAATGCGGAATGGCTGACCAGGCTCAACTATATCGACATGCTGCGCGAGGTCGGCCGCCACTTCTCGGTCAACCGCATGCTGTCGATGGATTCGGTGAAGCTGCGCCTGGAGCGCGAGCAGGAGCTCTCGTTCCTCGAATTCAACTACATGATCCTGCAGGCCTACGACTTCACCGAACTCGCCCGCCGCTATGGCTGCAACCTGCAGATGGGCGGCTCGGACCAGTGGGGCAACATCGTCAACGGCATCGACCTCGGCCGGCGCCTGGGCACGCACCAGCTCCATGCGCTGACGACCCAGCTCCTGACCACCGCCTCGGGCGCCAAGATGGGCAAGACCGCCGCCGGCGCGGTGTGGCTCAACGAGGACATGCTGTCGCCTTACGACTACTGGCAATATTGGCGCAATGCCGAGGACGCCGATGTCGGGCGCTTCCTCAAGCTGTTCACCACGCTGCCCTTGTCGGAGGTGGAGCGGCTCGCGGCACTCGGGGGAGCCGAGATCAACGAAGCCAAGAAGATTCTCGCCACCGAGACGACGGCGCTGGTGCACGGGCGCGACAAGGCGCTGGCCGCCGAGGAGACCGCGCGCAAGACCTTCGAGGAAGGCACGCTCGCCGAGAGCCTGCCGACCGTCGCGATCGAAGGACTCGGTGCCGGCGTCGGCGTGCTGACCGCCTTCGTGGCCGCGGGCCTGGTGCCCTCCACCTCGGAGGCGCGCCGGCAGATCAAGAGCGGCGGCCTCAGGGTCAACGACCAGCCCGTGACGGACGAGCGCGCGGTGCTGACGCTCGGCGACCTCAGCCCGGAAGGCGTGATCAAGCTGTCGATGGGCCGCAAGCGGCACGTGCTCCTCAAGCCCAAGTGA
PROTEIN sequence
Length: 416
MTRFTSDFLRILDERGYIHQTSDPEGLDALAAKGEVVGYIGFDCTARSLHAGSLVQIMLLHWLEKTGNKVIALMGGGTTRVGDPSGRDEARKLLSVEDIEENKRAIQTIFDRFLSFGPGPRDAIMVDNAEWLTRLNYIDMLREVGRHFSVNRMLSMDSVKLRLEREQELSFLEFNYMILQAYDFTELARRYGCNLQMGGSDQWGNIVNGIDLGRRLGTHQLHALTTQLLTTASGAKMGKTAAGAVWLNEDMLSPYDYWQYWRNAEDADVGRFLKLFTTLPLSEVERLAALGGAEINEAKKILATETTALVHGRDKALAAEETARKTFEEGTLAESLPTVAIEGLGAGVGVLTAFVAAGLVPSTSEARRQIKSGGLRVNDQPVTDERAVLTLGDLSPEGVIKLSMGRKRHVLLKPK*