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berkeley_reactor_200306_biofilm_scaffold_95231_175

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 182365..183345

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035DC92B similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 320.0
  • Bit_score: 518
  • Evalue 3.50e-144
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EIM25685.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 324.0
  • Bit_score: 452
  • Evalue 4.30e-124
periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 325.0
  • Bit_score: 418
  • Evalue 1.10e-114

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGATCGATCGCCGTTCCCTGTTGCAGATCGCCGCCGGCGGCGCCGCCGTCACGGCCTTCGGGCTGCGCCCGGCCTATGCGGCGCTGCCGAAGCTGAAGAAGAAGGACGTCTACAAGGTCGGCTTCGCCCAGACCGAGAGCAACAATCCCTGGCGCCTGGCCCAGACCGCGAGCATGAAGGCGGAGGCCGAGAAGCGCGGCTGGCAGCTGGTCTATACCGACGCCGCCGGCTCCGCCGCCAAGCAGGTCGCCGACGTGCGCTCGATGATCGCCCAGAAGGTCGACGTCATCCTGCTGTCCCCGCGCGAGGAGAAGCCGCTGATCCCGGCGGTGATGGAGGCCAAGAAGGCCGGCATCCCGATGTTCCTGATCGACCGCGGCGTCGATGCGACCCTGGCCAAGGGCGGCGTCGACTATGTGGCCTTCATCGGCTCGGACTTCGTCAAGGAAGGCCATCAGGCCGCCGAGGCGCTGACCAAGGCGGTGGACGGCAAGGCGCTGATCATCGAGCTGCAGGGCACGATCGGCTCCTCGCCGGCCAACGACCGCAAGAGCGGGTTCGCCGACTTCATCAAGGCCCATCCGGAGATGAAGATCATCGCCTCCCAGTCCGGCGACTTCGCCCGCGACAAGGGCCGGCAGGTGTTCGAGACCCTCTACCAGGCGCATCCGGAAGCCACCGCCCTCTACTCGCACAATGACGAGATGACCATGGGCGCTATCGCGGCGATGGAAGCGGCCGGCAAGGTGCCGGGCAAGGACCTGATCATCGCCTCGATCGACGGCACGAAGGACGCGACCCAGGCCATCCAGGACGGCAAGGTGCTCGTCGTGGTGGAGTGCAATCCGAAGTTCGGCCCGGCGGCCTTCGACGCCATCGTGAAATATGCCGCGGGCGAGGCGATCGCGCCCCGGCTCGTCAACACCGACCGCGTCTTCACCAAGGAGAACGTGGCGGCCTACCTGCCGGAAGCCTATTGA
PROTEIN sequence
Length: 327
MIDRRSLLQIAAGGAAVTAFGLRPAYAALPKLKKKDVYKVGFAQTESNNPWRLAQTASMKAEAEKRGWQLVYTDAAGSAAKQVADVRSMIAQKVDVILLSPREEKPLIPAVMEAKKAGIPMFLIDRGVDATLAKGGVDYVAFIGSDFVKEGHQAAEALTKAVDGKALIIELQGTIGSSPANDRKSGFADFIKAHPEMKIIASQSGDFARDKGRQVFETLYQAHPEATALYSHNDEMTMGAIAAMEAAGKVPGKDLIIASIDGTKDATQAIQDGKVLVVVECNPKFGPAAFDAIVKYAAGEAIAPRLVNTDRVFTKENVAAYLPEAY*