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berkeley_reactor_200306_biofilm_scaffold_95231_180

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 187345..187725

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE0B2D related cluster n=1 Tax=unknown RepID=UPI0003CE0B2D similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 120.0
  • Bit_score: 109
  • Evalue 1.40e-21
DNA-binding protein {ECO:0000313|EMBL:ESY64084.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 120.0
  • Bit_score: 109
  • Evalue 2.00e-21
Toxin of toxin-antitoxin (TA) system, containing PIN domain for nucleic acid binding protein similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 82.0
  • Bit_score: 100
  • Evalue 2.50e-19

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGACCTTCGTCGTCGATGCGTCCATGGCCGCCGCCTGGATGCTGCCGGACGAGCACAGCCCTGCAACCGACGCCATCCTCCAGAAATTGCTCGGAACCGTGGCTGAGGTGCCGTCGCTGTTCTGGCATGAGGCACGCAACGTCCTGCTCATGGCCGAACGCCGCGGCCGCATAGGGTCAGGAGAAGCGATTCAGTTCATGGATCGTCTGCGCCGGCTGCCGCTGGAGGATGCCGGCGCAGGCTCGATGACATCGTGCTTAGGCTCGCGACAACGCACGGTCTCAGTGTCTACGACGCGGCCTATCTCGCCCTTGCCGTCGAAGCTGCACTGCCGCTGGCCACCCTCGATCGCAAGCTGGCGACGGCAGCTCGCGGCATGA
PROTEIN sequence
Length: 127
MTFVVDASMAAAWMLPDEHSPATDAILQKLLGTVAEVPSLFWHEARNVLLMAERRGRIGSGEAIQFMDRLRRLPLEDAGAGSMTSCLGSRQRTVSVSTTRPISPLPSKLHCRWPPSIASWRRQLAA*