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berkeley_reactor_200306_biofilm_scaffold_95231_216

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 220626..221966

Top 3 Functional Annotations

Value Algorithm Source
Trehalosemaltose ABC transporter n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JL40_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 430.0
  • Bit_score: 551
  • Evalue 6.60e-154
thuE; trehalosemaltose ABC transporter similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 430.0
  • Bit_score: 551
  • Evalue 1.90e-154
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJK78915.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 430.0
  • Bit_score: 551
  • Evalue 9.20e-154

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
ATGTCGGATAGCAACGATCGGGAGTCGAAGACCGCGTGGAAGCCCGCGCATCGCATCGCACGGCGCCAGTTCCTGAAGGCGACCGCGCTGGCCGCCGGCGGCCTGCTCGCCGCGCCGGCCGTGCTGCGCCATATCGAGGTGGCGCAGGCCGCGGACAGGACGGAGATTTCCTTCGCCAGCGCCAAGTTCTTCGGCAAGAGCACCGTGGCGCAGGTCGTCGAGGCCTTCAACCAGTCGCAGGGCAAGATCCTGGTCAAGTACGACGAGCTGCCGCCGCCCAGCGCCTCGACCGAGGTGCATCAGGGGCTGGTGCAGCGCCTGGCCAAGAAGGACGGCACGCCGGACGTGTTCACGCAGGACGTGGTCTGGATCGCCGAGTTCGCCGGCGCCGGCTGGGCGCTGCCGCTCGACGAGTACGTTTCCGCCGACGAGGCGGGCCAGTACTTCCCGGGCGTGCTGGCGGCCTGCCGCTGGAACGGCAAGCTCACCGCCCTGCCCTGGTTCGTCGATTCCGGCATGCTCTACTATCGCACCGACCTCCTGAAGGAGATCGGCGCCGGCGTTCCCGAGACGTGGGACCAGCTCGTCGCCGCCGCGCAGGCCCTGATGAAAGCCGGCAAGGCCAAGATCGGCTTTTCCTGGCAGGCCAAGCAGGCCGAGGTGCTGATCTGCGACCTCGTCGAGTTCGTCACCTCCAACGGCGGCGCCATCCTCGGGCCGGACGGCAAGACGGTCGAGATCACCAAGCCGGCCGCGGTCGAGGCGGTGCAGTTCATGTACGACACCATCGCCAAGCACAAGATCAGCCCGCCGGACGTGCGCAGCTGGGACGAGGAGCCCTCGCGTGCGCCCTTCACCGGCGGCGACGCGGCCTTCCTGCGCAACTGGTCCTATGTCCATCCCATCGCCGAGGATCCGAAGTCGTCCTCCATCGCCGGCAAGGTCGGCGTCGCGCCGCTGCCGCACTTCGCCAAGGGCAAGAGCGCGGCGTGCCTCGGCGGCTACCAGTACGGCGTCAATGCCGCGACAAAGAACCGCGACGCGGCGATCGAGTTCCTGAAATGGCTGTCGAGCCCGGAGACGCAGCTGCGCTTCGCCGTCGAGCTCGGACTCGCGCCGAGCCGGCCGGGCGTGTTCGATTCCGCCGAGCTCGGCAAGGCCCAGCCGTTCATGCAGACGCTGAAGCCGGTCTTCGTCGGCGCGACGGCGCGGCCGGTCACCCCGAAATACGCCCAGGTGACGCTGGCGCTGCAATCGGCGGTGTCCAAGGCCGTGACCCACGGCAACGTCGCCGAGGCGCTCGGCGAGGCCAGGCGCAAGCTCGAGCAGATCGTCGCCTGA
PROTEIN sequence
Length: 447
MSDSNDRESKTAWKPAHRIARRQFLKATALAAGGLLAAPAVLRHIEVAQAADRTEISFASAKFFGKSTVAQVVEAFNQSQGKILVKYDELPPPSASTEVHQGLVQRLAKKDGTPDVFTQDVVWIAEFAGAGWALPLDEYVSADEAGQYFPGVLAACRWNGKLTALPWFVDSGMLYYRTDLLKEIGAGVPETWDQLVAAAQALMKAGKAKIGFSWQAKQAEVLICDLVEFVTSNGGAILGPDGKTVEITKPAAVEAVQFMYDTIAKHKISPPDVRSWDEEPSRAPFTGGDAAFLRNWSYVHPIAEDPKSSSIAGKVGVAPLPHFAKGKSAACLGGYQYGVNAATKNRDAAIEFLKWLSSPETQLRFAVELGLAPSRPGVFDSAELGKAQPFMQTLKPVFVGATARPVTPKYAQVTLALQSAVSKAVTHGNVAEALGEARRKLEQIVA*