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berkeley_reactor_200306_biofilm_scaffold_95231_224

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(227355..228848)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW36_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 479.0
  • Bit_score: 726
  • Evalue 9.80e-207
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EIM28178.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 479.0
  • Bit_score: 726
  • Evalue 1.40e-206
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 486.0
  • Bit_score: 689
  • Evalue 3.70e-196

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGCCCTCTCCGGACGATGCGACCGCCACGACGCCGGACGACCGCGACGACGCCAACATGTTCGACCTGGCGCCCGTCTCCCTGTGGGTCGAGGACTATAGTGGCCTCAAGCGCCTGCTCGATGAGTGGCGGGCGGCCGGCGTCACCGACCTGCGTGGCCATCTCCTTGCCGATCCCACGCGCATCAAGGCCTGCGCCGACCGCATCCGCGTCCTCAAGGTCAATCGCAGGACCCTGTCGCTGTTCGAGGCCAGGGATTTCGATCATCTCGTCGCCGATCTCGGCACGGTGTTCCGCGACGACATGCTGATGACCCATCTCGACGAGCTGGTGCAGCTGTGGGAGGGGCGGTGCGAATTCTCCAGCCACACCGTCAACTACACGCTCACCGGCCGCCGCCTCGACATCCAGCTCAAGGGCAGCGTGCTGCCGGGCCATGAGGAGACCTGGTCGCGCGTGCTCGTCGCGGTCGAGGACGTCACCGAGCGTGAGACGGCCCGCCGCCGGCTCGCCGCCGCCGAGGCCTATGCCCGCGGCCTGTTCCACCATTCGCCGGTGTCGCTGTGGGTCGAGGATTTCAGCGCCATCAAACGCCTGATGGACGATCTGCGTGAGCGCGGCATCGTCGATTTCCGCACCTTCACCGACGTGCATCCCGAGTTCGTCGCCCGCTGCATGAGCGAGATCCGCGTGGTCGACGTCAACCGCCACACGCTCGACCTGTTCTGCGCCGCCGACAAGGACGGGCTGCTCCTGCGTCTGCGCGACGTCTTCCGGGACGGCATGCAGCAGCATTTCCGTGAGCAGCTGATCGATCTGTGGCAGGGCAGGCTGTTCCAGCAGCGCGAGGTGATCAACTATTCCCTGGCCGGCGACGAGCTGCATCTCCACCTGCAGTTCTCGGTCTTTCCCGGCCACGAGCGGGACTGGGCCCTGGTGCAGGTGGCTCTCACCGACATCACCGCCCGCAAGAAGGCCGAGGCCTATCTGGAGTATCTCGGCAAGCACGACGTGCTGACCAAGCTCTATAACCGGTCCTTCTATGTCGACGAGCTCAACCGCCTGGAGCGCAAGGGCTCCTCGCCGATCACCATCATCATGGCCGACCTCAACGGGCTCAAGGCGGCCAATGACCAGCTCGGCCACGCCGCCGGCGACGAGATGCTGCGCCGGGCCGGCGAGATCCTGGGCAAGCTGGTGGACAAGCCGGGCCACGCCGCCCGCATCGGCGGCGACGAGTTCGCCATCCTGCTGCCCGCCGTCGATGAGCGGGGGGCGGAGCTGGTGATGGAGGACATCGAGCAGCTGGTCGAGCTCAACAACCAGTTCTACACCGGCACCCCGCTCAGCTTTGCGCTCGGCGCCGCCACCAGCCTCCCCGGCGAACGTCTGGAGCAGGTGATCAAGCGGGCGGATGCCCGCATGTACGAGGCCAAGCGCGCCTACTATGCCGACGACGCCCACGACCGCCGCCGCAGCCTCGCTGCCGAATAG
PROTEIN sequence
Length: 498
MPSPDDATATTPDDRDDANMFDLAPVSLWVEDYSGLKRLLDEWRAAGVTDLRGHLLADPTRIKACADRIRVLKVNRRTLSLFEARDFDHLVADLGTVFRDDMLMTHLDELVQLWEGRCEFSSHTVNYTLTGRRLDIQLKGSVLPGHEETWSRVLVAVEDVTERETARRRLAAAEAYARGLFHHSPVSLWVEDFSAIKRLMDDLRERGIVDFRTFTDVHPEFVARCMSEIRVVDVNRHTLDLFCAADKDGLLLRLRDVFRDGMQQHFREQLIDLWQGRLFQQREVINYSLAGDELHLHLQFSVFPGHERDWALVQVALTDITARKKAEAYLEYLGKHDVLTKLYNRSFYVDELNRLERKGSSPITIIMADLNGLKAANDQLGHAAGDEMLRRAGEILGKLVDKPGHAARIGGDEFAILLPAVDERGAELVMEDIEQLVELNNQFYTGTPLSFALGAATSLPGERLEQVIKRADARMYEAKRAYYADDAHDRRRSLAAE*