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berkeley_reactor_200306_biofilm_scaffold_95231_226

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 229813..231213

Top 3 Functional Annotations

Value Algorithm Source
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 466.0
  • Bit_score: 703
  • Evalue 1.50e-199
Uronate isomerase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HMP2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 466.0
  • Bit_score: 703
  • Evalue 1.10e-199
glucuronate isomerase similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 466.0
  • Bit_score: 683
  • Evalue 2.50e-194

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Taxonomy

Phyllobacterium sp. YR531 → Phyllobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGGCTCTCCATCCCGACAGGCTGCTGCCGACCGAGCCGGCCACCCGCGCCATCGCGCGGCGCCTCTATGACGCCGTCGCCGGCCTGCCGATCCTGTCGCCGCACGGCCACACCGATCCGCGCTGGTACGCGACGGACGAGGCTTTCCCCGATCCCGCCACCCTGTTCGTCAAGCCCGACCACTATGTCTTCCGCATGCTCCATTCGCAGGGCGTGCGCCTGGAAGACCTCGGCATCCCGACCCGCGACGGGACGCGGGTCGAGACGGACGGGCGCCGGATCTGGCGCATCTTCGCCCGGCACTGGCATCTCTTCCGCGGCACGCCGACGCGGCTGTGGTTCGAACATGCGCTGGAGCAGATGTTCGGCATCGAGGAGCGGCTCGGCGAGGCCAATGCCGACCGCATCCACGACACCATCGCCGAGGCGCTCGCCAAGCCCGAATTCCGCCCGCGCGCGCTCTATGACCGCTTCGACATCGCGGCGATCGCCACCACGGATGCGGCGCTCGACGACCTCGCCTGGCATGCCGAGATTCGCGCATCGGGCTGGCACGGAAGGGTGATCCCGACCTATCGTCCGGACGCCGTCGTCGATCCCGCACGCACGGATTTCCGTGACAATGTCGAGCGCCTGCTGGCGCTCTGCCAGGCGCCGGCGACCTGGGAGGGTTATCTCGATGCGCACCGGGTCCGCCGCGCCCATTTTCGCGCGCACGGCGCCACCGCCACGGACCACGGCCATCCCACGGCGCGGACGGCGGCGCTCGACACGGCCTCAGCCCGGGCGCTGTTCGAGCGGGTGCTGCGTCCGCCCGTGTCGGCGGCGGACGCCGAGCTGTTCCGCGCCCAGATGCTGACGGAGATGGCCCGCATGAGCCTGGAGGACGGGCTCGTCATGCAGATCCATCCGGGCTCCTGGCGCAACCACAATCCCGGCCTGCTCGACCGCTTCGGTCCGGACATGGGCGCCGACATCCCGACGCCCACAGACTACGTCCAGGCACTGAAGCCCCTGCTCGACATCGTCGGCAACGATCCGCACCTGACCCTGATCCTGTTCACGCTGGACGAAACCGCCTACGGCCGGGAGCTGGCGCCGCTCGCCGGCCATTATCCCTGCCTGCGGCTCGGCCCGCCCTGGTGGTTCTTCGACAGCCCCGAGGGCATCCGCCGCTTCCGCGAGCTGACCACCGAGACCGCCGGCTTCTACAACACGGTCGGCTTCAACGACGACACCCGGGCCTATCTCTCTATTCCCGCACGCCACGACATGGCGCGCCGAGCCGACTGCGCTTTCCTGGCGCGGCTGGTGGCCGACCATCGCCTCGACGAGGACGAAGCACACGAGGTCGCGCACGCCCTGACCCACGGCCTCGTCAAGGACGCCTATCGCCTGTGA
PROTEIN sequence
Length: 467
MALHPDRLLPTEPATRAIARRLYDAVAGLPILSPHGHTDPRWYATDEAFPDPATLFVKPDHYVFRMLHSQGVRLEDLGIPTRDGTRVETDGRRIWRIFARHWHLFRGTPTRLWFEHALEQMFGIEERLGEANADRIHDTIAEALAKPEFRPRALYDRFDIAAIATTDAALDDLAWHAEIRASGWHGRVIPTYRPDAVVDPARTDFRDNVERLLALCQAPATWEGYLDAHRVRRAHFRAHGATATDHGHPTARTAALDTASARALFERVLRPPVSAADAELFRAQMLTEMARMSLEDGLVMQIHPGSWRNHNPGLLDRFGPDMGADIPTPTDYVQALKPLLDIVGNDPHLTLILFTLDETAYGRELAPLAGHYPCLRLGPPWWFFDSPEGIRRFRELTTETAGFYNTVGFNDDTRAYLSIPARHDMARRADCAFLARLVADHRLDEDEAHEVAHALTHGLVKDAYRL*