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berkeley_reactor_200306_biofilm_scaffold_95231_228

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 232581..233702

Top 3 Functional Annotations

Value Algorithm Source
Ferredoxin n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F5C2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 356.0
  • Bit_score: 232
  • Evalue 4.30e-58
Ferredoxin {ECO:0000313|EMBL:EHS52056.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 356.0
  • Bit_score: 232
  • Evalue 6.10e-58
ferredoxin similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 342.0
  • Bit_score: 224
  • Evalue 4.40e-56

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGCGGAACAGCGTTCTCCTGTCGAAGCTGCGACTGGTCAGCGGCCTGGTGCTGATGACCTTCGTCGCCGGGCATCTCGTCAACGCCGCGCTCGGCCTGGTCTCGCTGCAGACCATGGAGGACTGGCGCGTCGTGCTGATGCGGCCCTGGCTCACCCTGCCCGGCCAGGTGCTGCTCTATGGCGCGCTCGTCGTGCATGCCGGCCTCGGCATCCTCTCGATCCTGCGCCGCCCGCGCCTCACCCTCACCCGCAAGGACTTCGCGCAGATCGCCTTCGGGCTGCTGATCCCGGCTCTGCTGGCGGCGCACCTGCTGGCGACGCGGGTCGCCGGCCTGCTCGCCGATTTCCAGCCGGGCTACTCCTGGATCCTCACCGTCTACTGGAAATGGGCGCCTAATTACGGCTTGCAGCAGGTCTTCCTGGTGGCGGTGGTCTGGGCGCACGGCTGCATCGGCATGCTGTCCTGGCTGAACCTCAGGCCCTGGTGGCCGCGGATCGCCGCCTTCGCCTATCCCCCGGTCTTCGCCCTGCCGATCCTGGCCCTGCTCGGCTTCGTGCATGCCGGTGACGAGGTGCTGGCCCGGCTGAGCAACGATGCCGCCTTCAAGGCCATGGTGCACGAGGCGGCGCAGAAGGGCGCACCGGTGGCGCCAACGCTGCTGGCCTGGCAGCACGGCCTCCTCGTCGCCTATGCGCTGGTGGTGGCCGTCACCCTCGCGCCTGGGGCCTGGCGCGTGCTGCGGTCCCGGTTCGCCGCGGCCACGGCGGCGTCGATCCGCTATGTCGACGGCCCGATCGTGACGGCAGCGGTGGGATCGACCCTGCTGGACGCCAGCCGCCGCCATCATGTGCCGCATTCGGCGGTGTGCTCGGGCCATGCGCGCTGCGGCACATGCCGGGTGCGGATCACGGCGCCGCCGGGTGTGCTGTCGCCCCCTTCCGCCGACGAGATGCACCTGCTGCGGCATCTGCATGCCGGCGACGCAGTGCGCCTCGCCTGCCGGGCGACCATTCTGCGGCCGGTGTCCTTCACATTGGAGCGGCTGGTGCCGGTGGAGATCGCCGACGCCGCCGCGCGCGGCGAAGCCCTGCCCTCCGGCGGAACAGAGGCCGTCTCGTGA
PROTEIN sequence
Length: 374
MRNSVLLSKLRLVSGLVLMTFVAGHLVNAALGLVSLQTMEDWRVVLMRPWLTLPGQVLLYGALVVHAGLGILSILRRPRLTLTRKDFAQIAFGLLIPALLAAHLLATRVAGLLADFQPGYSWILTVYWKWAPNYGLQQVFLVAVVWAHGCIGMLSWLNLRPWWPRIAAFAYPPVFALPILALLGFVHAGDEVLARLSNDAAFKAMVHEAAQKGAPVAPTLLAWQHGLLVAYALVVAVTLAPGAWRVLRSRFAAATAASIRYVDGPIVTAAVGSTLLDASRRHHVPHSAVCSGHARCGTCRVRITAPPGVLSPPSADEMHLLRHLHAGDAVRLACRATILRPVSFTLERLVPVEIADAAARGEALPSGGTEAVS*