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berkeley_reactor_200306_biofilm_scaffold_95231_229

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 233699..235669

Top 3 Functional Annotations

Value Algorithm Source
Mechanosensitive ion channel family protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LDW9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 660.0
  • Bit_score: 342
  • Evalue 6.80e-91
Mechanosensitive ion channel protein {ECO:0000313|EMBL:KAJ03142.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.4
  • Coverage: 668.0
  • Bit_score: 359
  • Evalue 9.90e-96
MscS family protein YbiO similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 657.0
  • Bit_score: 332
  • Evalue 1.50e-88

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Taxonomy

Sulfitobacter mediterraneus → Sulfitobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1971
GTGAGGGCGGGAACCACCGTCCTCCCGCTCGCCCTGCTCGGCCTCGGCATGCCCCTGGCCGTTGCGCAGGACGGCTCCTCCGCGCCGGTGCTCGACGGCCTCGTCGCCGACCTGCAATCGGCGCCGGGCGACTGGACGGCGCTGTCGGAGCGCTTTTCCGCGGCCTGGTGGAGCGGCGACCTCCTGCGCGCCGTCACGCTGCTCCTGGTGCTGCTGATGATCGCGGCGAGCTGCGAGCTGCTGTTCTGGTGCTACGCCGCACCGGCCCTGCGCGCGCTGCAGGCCGTGCCGGCCGCTGCGCCCCGCCAGCGCGCCCTGATCGCGGTGGAGCAATTCGCCTTGCGCCTGTTCGGGGTGGCGCTGTCCACCGGTGCCGCCTTCGGCGTCACCACGATGATGACGTGGCCGCCGGTGGTGACCGCGACGGCTGCCATCGTGGCCACTGCCCTGGCGGTGCTGCGCGGCGCTGGGCTCCTGGCCGACCTCCTGCTCTCGCCGCGCGCCGCGTCGCGACGGGTCTGGCCCTGGCCCGACTCCACGGCGCGGCGGGTCCATGCCCATGTCATGGCGGTCGCGGTGACCGCCTGCCTCGGCTATGCCGCCAGCCGGCTGCTCGGGGAGGTCATGGCCGCGCCGCATGCCGCCGAGATCACCATCGCTCTCGCCGGGGTCGCGACCGGCCTCGCCCTGCTCGTCGCCCTGTCTGCCTGGTCGCGGGCGCGCCGTCGCGCGCGGCCGGCGCAGGGCCGCAGCCTCGCCGACCTCCTGCCCTTCGCTGCGGCCGCCGTGCTCGTCGCCGGCATGCTCGCCTGGATCGCCGGCGCTTATCAGGCGGTGTGGACCGGCCTGATCCTCGGCGCCCTCGGCCTCGCCGATTTTGCGGCCGGCGGCATCCTGCACGCGCTCCTGCGCGACCGGCCCGATGCCGACGAAGCGGAAAGCCGGCCGGACGCCATGAGCCTCGCCACCGCCTACGAGCCGGTGATCCGCCGCTTTGCCCGATTCTGCCTGGCGCTCGCGGCCTTCCTGGCGATTCTCATGGTCTGGCGCGTCAACGTGCTGATGCCGGCCTCATCGAAGGGACCGGTCGCGATGCTGATCGACCAGTCGATCAACGTGCTTGTGGTCGTGCTGCTCTGCGATCTCGCTTGGCTCTGGGTGCGCACCTTCATCGACCGCCAGCTGCGCCTGGCGCCCGGCATGGGCGACGGCGAGGCGGCCTCGCGCCTCTCCACCCTGCTGCCGATGATCCGCACGGCGGTGCTGATCGTGCTCGTCGGGCTGACGACGCTGGTGGCGCTGTCGGCGATCGGCGTCAACATCGCTCCGCTCCTCGCCGGCGCCGGGGTCGTCGGCCTCGCCATCGGCTTCGGCGCCCAGACCCTGGTGCGCGACATCATCACCGGCGTGTTCTTCCTGATCGAGGACGCATTCCGCGTCGGGGAATATATCGACGTCGGTGCGCGCAAGGGCACGGTGGAGGCGATCTCGCTGCGCTCGCTGCGGCTGCGCCACCAGCGCGGCGCCCTGCACACCGTGCCCTTCGGCGAGATCAAGTCGCTGTCCAACGAGAGCCGCGACTGGTCGATCGTCAAGCTGGAGTTCCGCATCCCCTTCGACACCGACCTGGCGCTGGTCAAGAAGATCATCAAGAGCATCAATGCCGAGATCATGGCCGATCCCGAGCTCGGCCCGAACATGCTGGAACCGCTGAAGAGCCAGGGCATCAACCGGTTCGAGGAATATTGGATGGTGCTCAGGGTCAAGTACACCGCCAAGCCCAATGCCTATCTCTTCATGATCCGCCGCGAGGCCTATCACCGCATCCGCGATGCCTTCGACAAGGCCGGGATCAAGCTCGGCGAGCGCAGCGTCAAGGTCGAGATGGCCGGGCGTGCCGCCATCGACGACATCGCGGCCGCCGGCGGTGCCGGCGACTTCGACGACAGGCCGGCGCCGTCCGCCTCCTGA
PROTEIN sequence
Length: 657
VRAGTTVLPLALLGLGMPLAVAQDGSSAPVLDGLVADLQSAPGDWTALSERFSAAWWSGDLLRAVTLLLVLLMIAASCELLFWCYAAPALRALQAVPAAAPRQRALIAVEQFALRLFGVALSTGAAFGVTTMMTWPPVVTATAAIVATALAVLRGAGLLADLLLSPRAASRRVWPWPDSTARRVHAHVMAVAVTACLGYAASRLLGEVMAAPHAAEITIALAGVATGLALLVALSAWSRARRRARPAQGRSLADLLPFAAAAVLVAGMLAWIAGAYQAVWTGLILGALGLADFAAGGILHALLRDRPDADEAESRPDAMSLATAYEPVIRRFARFCLALAAFLAILMVWRVNVLMPASSKGPVAMLIDQSINVLVVVLLCDLAWLWVRTFIDRQLRLAPGMGDGEAASRLSTLLPMIRTAVLIVLVGLTTLVALSAIGVNIAPLLAGAGVVGLAIGFGAQTLVRDIITGVFFLIEDAFRVGEYIDVGARKGTVEAISLRSLRLRHQRGALHTVPFGEIKSLSNESRDWSIVKLEFRIPFDTDLALVKKIIKSINAEIMADPELGPNMLEPLKSQGINRFEEYWMVLRVKYTAKPNAYLFMIRREAYHRIRDAFDKAGIKLGERSVKVEMAGRAAIDDIAAAGGAGDFDDRPAPSAS*