ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_95231_231

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(237255..238109)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZZE1_RHILW similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 253.0
  • Bit_score: 257
  • Evalue 9.60e-66
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 253.0
  • Bit_score: 257
  • Evalue 2.70e-66
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACI54734.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 253.0
  • Bit_score: 257
  • Evalue 1.30e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAATCTTATGGCCGAACGGTATCCAACCTGGACCGAGGCGGCAACCGGGGAATCGACCATGAGGCCTTCGCCGAAGCCGGCCACGCCGCAGGACGGCATCGTCTGGATCACCGGAGCGAGCTCCGGCATCGGCCGGGCCGTGGCCATGGCGCATGCGCGCCGCGGCTGGACGGTCGCGGTGACCGCCCGGCGCGAGGGCGAGCTGGCACGCCTGTCGCAGGAAGCCGCGGCTGCCGGCGGCCGCATCGTCGCCCATCCCGGCGACGTCACCGACGCCGCCGGGATGGCGGCGACCGTGGCGGCGATCGAGCTGGCGCACGGTCCGATCGCCCGGGCCCTGTTCAATGCCGGGCTCTACATTCCGGTGCGGGCCGCGACGCTGGATGCCGCGGCCTATGCCCGCAGCTTCGAGGTCAACGTCATCGGCGTCGCCAACGGCCTTGCCGCCGCGCTGCCGGGGATGCTGGCACGCCGGTGCGGCCAGGTGGCCATCACGGCCTCGGTAGCCGGCTATGGCGGCCTGCCGACCGCCTCGGCCTATGGCGGCAGCAAGGCGGCCCTGATCAACATGGCGGCCGGGCTCAAGCCGGATCTCGACCCGGCCGGCGTGCTGATCCAGGTGATCTGCCCGGGCTTCGTCAGGACGGGCCTGACCGCGGGCGGCGCCTTTCCCAAGCCGTTCCTGATGAACGCCGACCGGGCTGCGCTGCGCATCCTGGCCGGGCTGGAGACGACACGGTTCGAGATCGCCTTTCCCCGGCGCATGGCGCTGATGGTCAAGGCCGCCAACCTGCTGCCCTATCGTGCCTATTTCGCTCTTCTCGCCCGCGGGGCAGGGCGCCTGCGCGGATAG
PROTEIN sequence
Length: 285
MNLMAERYPTWTEAATGESTMRPSPKPATPQDGIVWITGASSGIGRAVAMAHARRGWTVAVTARREGELARLSQEAAAAGGRIVAHPGDVTDAAGMAATVAAIELAHGPIARALFNAGLYIPVRAATLDAAAYARSFEVNVIGVANGLAAALPGMLARRCGQVAITASVAGYGGLPTASAYGGSKAALINMAAGLKPDLDPAGVLIQVICPGFVRTGLTAGGAFPKPFLMNADRAALRILAGLETTRFEIAFPRRMALMVKAANLLPYRAYFALLARGAGRLRG*