ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_95231_232

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 238124..239155

Top 3 Functional Annotations

Value Algorithm Source
cysteine synthase A (EC:2.5.1.47) similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 342.0
  • Bit_score: 540
  • Evalue 1.90e-151
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6C9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 342.0
  • Bit_score: 548
  • Evalue 2.50e-153
O-acetylserine dependent cystathionine beta-synthase {ECO:0000313|EMBL:CEG08118.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 342.0
  • Bit_score: 548
  • Evalue 3.50e-153

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGCCCTTCCGCACCGATCTCGTCGATGCCATCGGCCGCACGCCCCTGATCCGGCTCAGGCGCGCCTCCGAGGCGACCGGCTGCACGATCCTCGGCAAGGCGGAGTTCATGAACCCCGGCCAGTCGGTGAAGGACCGCGCAGCGCTCTATATCATCAAGGACGCGGTGCAGCGCGGCGCCCTGCAGCCGGGCGGCACCATCGTCGAAGGCACGGCCGGCAATACCGGCATCGGCATCGCCCTCGTGGCGGATGCGCTCGGCTTCAAGACGGTGATCGTCATCCCGGAGACGCAGAGCCAGGAGAAGAAGGACATGCTGCGCCTGGCCGGCGCCGAGCTGGTGGAGGTGCCGGCCGTGCCCTACGCCAACCCCAACAACTACGTGAAGGTGTCGGGGCGCCTTGCCGAGGAGTTGGCGCGCACCGTGCCGGGCGGCGCGGTCTGGGCCAACCAGTTCGACAATGTCGCCAACCGCCAGGCCCATATCGAGACCACCGCGCCGGAGATCTTCGAGGACACGGGCGGTGCGGTCGACGGCTTCATCTGCTCGGTCGGCACCGGCGGCACGCTGGCCGGCACCGGCATCGGGCTGAAGCAGCGCAACCCGGCGATCAAGCTCGGCCTCGCCGACCCGATGGGCGCGTCGATGTATTCCTTCTTCACCAAGGGCGACCTTTCCTCCTCCGGCTCGTCGATCTCCGAGGGCATCGGGCAGAACCGCGTCACCCGCAACGTCGAGGGCGCGCCGGTCGACTTCGCCTGCCAGATCCCGGACGAGGAAGCGGTGCCGATCGTCTTCGACCTGCTCCTGGAGGAGGGCCTGTGCGTCGGCCTCTCCACCGGCATCAACATCGCCGGCGCCATCCGCATGGCCAGGGAGATGGGCCCGGGCCACACCATCGTGACCATCCTGTGCGACTACGGCACGCGCTATCAGTCGAAGCTGTTCAACCCGGACTTCATGCGCTCGAAGGGCCTGCCGGTGCCGACCTGGCTGGAACGCAAGAGCGCGGTGAAGGTGCCCTACCTCTGA
PROTEIN sequence
Length: 344
MPFRTDLVDAIGRTPLIRLRRASEATGCTILGKAEFMNPGQSVKDRAALYIIKDAVQRGALQPGGTIVEGTAGNTGIGIALVADALGFKTVIVIPETQSQEKKDMLRLAGAELVEVPAVPYANPNNYVKVSGRLAEELARTVPGGAVWANQFDNVANRQAHIETTAPEIFEDTGGAVDGFICSVGTGGTLAGTGIGLKQRNPAIKLGLADPMGASMYSFFTKGDLSSSGSSISEGIGQNRVTRNVEGAPVDFACQIPDEEAVPIVFDLLLEEGLCVGLSTGINIAGAIRMAREMGPGHTIVTILCDYGTRYQSKLFNPDFMRSKGLPVPTWLERKSAVKVPYL*