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berkeley_reactor_200306_biofilm_scaffold_95231_259

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 266519..267355

Top 3 Functional Annotations

Value Algorithm Source
Putative polar amino acid ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LV91_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 270.0
  • Bit_score: 278
  • Evalue 3.90e-72
putative polar amino acid ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 270.0
  • Bit_score: 278
  • Evalue 1.10e-72
Putative polar amino acid ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB74060.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 270.0
  • Bit_score: 278
  • Evalue 5.50e-72

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGAACCAGCCCACCGCATCCTGGTCCCGCTTTCGCGCCTGGAGCCTCGCCGCTGCCGCGGCCGCGCTCACGGCAGGCCCTATCCCGGCCGCCCGCGCCGAGACGATCACGCCGCCGCCCGCCATCGCCGCGGCCAAGAAGATGGTCGTGTGCGCCGATATCGGGTCTCCGCCCCTCTCCTTCTACAAGGAGGACGGCAAGCTGGTCGGCGCCGAGGTTGATCTGTCGAACGCGATCGCCGGCCGCATGGGCGTCGGCACGGAATGGCGGGCCGTGCAGTTCGACGGCATCATCCCGGCCCTGCTCGCCAAGCAGTGCGATCTGATCATGTCCGAGCTCTATGACAAGCCCAAGCGCCGGGAGGTGGTCGACTTCGTCGACTATCTCGACTCCAGCCAGTCCCTCGTCGTGCAGAAGGGCAACCCGGCCGGCATCAAGGGGCTCGACGATCTGTCCGGCAAGAAGGTGGCCGTGGAGAACGGCACCACGATCCAGTCGCTCGTCGAGGAGCAGAACAAGAAATTCGCAAGCGAAGGCAAGCCCCCGGCCGAGGCGGTGGTCTTCCCCAAGGACACCGATGCCTTCCAGGCCCTGCGCATCGGCCAGGTCCAGGCCTACGGCACCACGATCAAGACGGCGGGCTACTACTTCACCCAGGCGCCGGACCTGTTCGACCTCGGCGGCGAGCCCTTCGCCAAGGCCGTGATCGGCGCCGCCTTCCGCAAGGACGACGTCGAGCTGCAGAAGGCCTTCGCCGCGGCATTGGCGGCGATCCGTCAGGACGGCTCCTACATGACCATCCTCAAGACCTGGGGTATCGAGCGCGACGCCCTCTGA
PROTEIN sequence
Length: 279
MNQPTASWSRFRAWSLAAAAAALTAGPIPAARAETITPPPAIAAAKKMVVCADIGSPPLSFYKEDGKLVGAEVDLSNAIAGRMGVGTEWRAVQFDGIIPALLAKQCDLIMSELYDKPKRREVVDFVDYLDSSQSLVVQKGNPAGIKGLDDLSGKKVAVENGTTIQSLVEEQNKKFASEGKPPAEAVVFPKDTDAFQALRIGQVQAYGTTIKTAGYYFTQAPDLFDLGGEPFAKAVIGAAFRKDDVELQKAFAAALAAIRQDGSYMTILKTWGIERDAL*