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berkeley_reactor_200306_biofilm_scaffold_95231_261

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 268134..268910

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Pseudomonas sp. PAMC 26793 RepID=UPI0002EEE0C4 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 259.0
  • Bit_score: 356
  • Evalue 1.40e-95
Glutamine transport ATP-binding protein GlnQ {ECO:0000313|EMBL:KDM68711.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 259.0
  • Bit_score: 374
  • Evalue 6.90e-101
arginine ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 259.0
  • Bit_score: 355
  • Evalue 1.10e-95

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Taxonomy

Acidiphilium sp. JA12-A1 → Acidiphilium → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
GTGAGCGAGCCCTCCGAATCCTGCGTGGTGCAGGCCGAGAACGTGGAGAAGTGGTTCGGACCGCTCCAGGTGCTCAAGGGCGTGTCCCTCTCGGTCCGGCGCGGCGAGGTGGTGGTGATCGTCGGCCCGTCCGGCTCCGGCAAGACCACCTTCGTGCGCTGCATCAACCATCTGGAGAAGATCCAGGGCGGCCGCATCCTGGTGAACGGCCATCTCATCGGCTATCGCCAGGCGGGCAAGCGCCTGGTGGAGGACCGTGAGCGCAACATCGCCCGCCAGCGCCGGGACATCGGCATGGTGTTCCAGCGCTTCAACCTCTTCCCCCATCTCACGGCCCTCGGCAACATCGTCGAGGCGCCGATCCAGGTCCGCGGCATCGACAGGGCCCGGGCCGAGGCGGAAGGGGCGGCGTTGCTGAAGCGGGTCGGCCTCGCCGAAAAGGCGGACGCCTATCCCGCCCAGCTTTCCGGCGGCCAGCAGCAGCGCGTGGCGATCGCCCGGGCGCTGGCGATGAAGCCGGCGCTGATGCTGTTCGACGAGCCGACGAGCGCCCTCGACCCGGAAATGGTCGGCGAGGTCCTGGAGGTCATGCAGGAGCTGGCCCGCGAGGGCATGACCATGGTGGTCGTGACCCACGAGATGGGATTCGCGCGGGAGGTGGCCGACCGCGTGGTGATGATGGACGGCGGCCAGGTGGTGGAGGAGGCGCCCCCGGCCCTGTTCTTCACCGCGCCGCGCTCCGAACGCACGCGCTCCTTCCTCGCCCGCCTGCTGTGA
PROTEIN sequence
Length: 259
VSEPSESCVVQAENVEKWFGPLQVLKGVSLSVRRGEVVVIVGPSGSGKTTFVRCINHLEKIQGGRILVNGHLIGYRQAGKRLVEDRERNIARQRRDIGMVFQRFNLFPHLTALGNIVEAPIQVRGIDRARAEAEGAALLKRVGLAEKADAYPAQLSGGQQQRVAIARALAMKPALMLFDEPTSALDPEMVGEVLEVMQELAREGMTMVVVTHEMGFAREVADRVVMMDGGQVVEEAPPALFFTAPRSERTRSFLARLL*