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berkeley_reactor_200306_biofilm_scaffold_107365_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(192..1067)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, IclR family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HX27_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 291.0
  • Bit_score: 488
  • Evalue 3.40e-135
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 291.0
  • Bit_score: 488
  • Evalue 9.70e-136
Putative transcriptional regulator, IclR family {ECO:0000313|EMBL:CAP43701.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 291.0
  • Bit_score: 488
  • Evalue 4.80e-135

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGCGCATCGAAGTCCTGGTCGACGTCAAGACCATCCTCGGCGAGGGCCCGCTCTGGGACGTGGACGAGCAGCGCCTCTATTGGATCGACAGCTTCGGCTGCAACGTCTTCCGCGCCACCGCGGACGGGCGCGAAGTGCGGGCCTGGGACGTGCCGGCCAAGATCGGCTCCATGGCGCTGCGCCGCCAGGGCGGGGCGGTGCTGTCGCTGCAGACCGGCTTCCACTTCCTCGACTTCAAGTCCGGCGAGACCAGCCTGATCGTCGATCCCGAGCCGGACGATCCGACCACCCGGATCAACGACGGCAAGGTCGACAAGCGCGGCCGCTTCGTCGCCGGCTCGATGGACACGATGGAGGCGGGGCCGAACGGCGCGCTCTACCGCCTCGACCCCGACCTCAGCCTGCACAAGCTCGACGACGGCATCATCGTCTCCAACGGCCCGTGCTGGAGCCCGGATGGGCGCATCTTCTACTTCGCCGATTCCTGGTCGGGCGAGATCTGGGCCTACGACTACGACCAGGACACCGGCGCCGTCGCCAACCGGCGCACCTTCACGCGCATCGACCGGTCCACCGGCGGCGCGGCGGACGGCTCCACCGTCGATGCGGAGGGGTATCTGTGGAACGCGCAGGTCTATGACGGCAAGATCATCCGCTACGCCCCTGACGGCTCGGTCGACCGCGTCATCGACATGCCGGTGAAGAAAGTGACCAGCGTCATGTTCGGCGGCCCCGAGCTCGACATCCTGTTCGTCACCTCCATGGCCAAGCCGCCTTTGCCGCGCTTCCCCGGCGACGGCATGCTGCGCGGCAGCCTGTTCGCCATCCACGGGCTAGGAATCCGCGGCGTGCCGGAGATGCGGTTCGCGGGGTGA
PROTEIN sequence
Length: 292
MRIEVLVDVKTILGEGPLWDVDEQRLYWIDSFGCNVFRATADGREVRAWDVPAKIGSMALRRQGGAVLSLQTGFHFLDFKSGETSLIVDPEPDDPTTRINDGKVDKRGRFVAGSMDTMEAGPNGALYRLDPDLSLHKLDDGIIVSNGPCWSPDGRIFYFADSWSGEIWAYDYDQDTGAVANRRTFTRIDRSTGGAADGSTVDAEGYLWNAQVYDGKIIRYAPDGSVDRVIDMPVKKVTSVMFGGPELDILFVTSMAKPPLPRFPGDGMLRGSLFAIHGLGIRGVPEMRFAG*