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berkeley_reactor_200306_biofilm_scaffold_111575_35

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(32072..33436)

Top 3 Functional Annotations

Value Algorithm Source
sdaA; L-serine ammonia-lyase (EC:4.3.1.17) similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 456.0
  • Bit_score: 583
  • Evalue 4.50e-164
L-serine dehydratase 1 {ECO:0000313|EMBL:EGO96393.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EGO96393.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 456.0
  • Bit_score: 583
  • Evalue 2.20e-163
L-serine ammonia-lyase n=3 Tax=Acidiphilium RepID=A5FX81_ACICJ similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 456.0
  • Bit_score: 583
  • Evalue 1.60e-163

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Taxonomy

Acidiphilium sp. PM → Acidiphilium → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
ATGATCTCCGTGTTCGACATCTTCAAGATCGGCATCGGCCCGTCCTCGTCGCACACGGTGGGGCCGATGCGGGCCGCGGGCCGCTTCGTCGAATCCCTGCGCCACAAGCATCTGTTCCATCATGCCAGCCGCATCGAGACGGTGCTGTTCGGCTCGCTCGCCTGGACCGGCCACGGCCATGCCACCGATACGGCCGTCATCCTCGGCCTGGCGGGCGAGCAGCCCGAGACCATCGATCCCGACGCGGTGCCGGCCATCATCGCCGACGCCGCCGGGGAGAAGATGCTGTCGCTCGGCGGCCGCCGCGCCATCGCCTTCGATCGGCCGCGCGACGTGGTCTTCGACCGCAAGACCCCGGCCAAGGGCCACCCCAACACCCTTTCCTTCACCGCCTATGACGAGCACGGCAAGGCGATGCTGACGGAATATTACTTCTCCGTCGGCGGCGGCTTCGTGCTGGCCGAGGGCGAGGAGGCCGTCGCCGCCGCGGCGGTGCCGGTGCCGCATCCCTTCCGCAGCGGCGCGGACCTGCTGGCGATCGGCCGGGCCCGGGGCCTCTCCATCGCCGGCATCGTCCTGGAGAACGAGACGGCGCGCCTGCCTGAGGAGGAGGTCCGCGCCCGCCTGGCCCGCATCCGCGCCGTCATGGATGCCGCCATCGACCGAGGCATGGCGCAGGAGGGCGAGCTGCCCGGCGGCCTCAGGGTCAAGCGCCGCGCCAAGGCGCTGCACGACCGCCTCAAGGCCGACCGCGGCCGCAACGTGCGCGCCGCCCACCAGGTGATGGACTGGGTCTCCCTCTTTGCCATCGCCGTCAACGAGGAGAACGCCGCCGGCGGGCGCGTCGTCACCGCCCCGACCAATGGCGCCGCCGGCATCGTCCCGGCGGTGCTGCGCTACTACCGCGAATTCTGCGACGCGTCCGAAGCCGGCGCCGACGATTTCCTGCTGACCGCCGCCGCCATCGGCACGCTGTTCAAGCTGAACGCTTCGATCTCCGGCGCCGAGGTCGGCTGCCAGGGCGAGGTCGGCGTCGCCGCCTCCATGGCCGCGGCGGGCCTCGCCGCAGCGCTCGGCGGCAGCAACGAGCAGATCGAGAACGCCGCCGAGATCGGCATGGAGCACCATCTCGGCATGACCTGCGACCCGATCGGCGGCCTGGTGCAGATTCCCTGCATCGAGCGCAACGCCTTCGGCGCCAACAAGGCCATCGCCGCCGCCTCGCTCGCCCTGCACGGCGACGGCACCCATAAGGTCAGCCTCGACCAGGTCGTCGCCACCATGCGCGCCACCGGCGCCGACATGCAGTCGAAATACAAGGAGACCTCGCAGGGAGGCCTCGCCGTCAACGCGGTGGAGTGCTGA
PROTEIN sequence
Length: 455
MISVFDIFKIGIGPSSSHTVGPMRAAGRFVESLRHKHLFHHASRIETVLFGSLAWTGHGHATDTAVILGLAGEQPETIDPDAVPAIIADAAGEKMLSLGGRRAIAFDRPRDVVFDRKTPAKGHPNTLSFTAYDEHGKAMLTEYYFSVGGGFVLAEGEEAVAAAAVPVPHPFRSGADLLAIGRARGLSIAGIVLENETARLPEEEVRARLARIRAVMDAAIDRGMAQEGELPGGLRVKRRAKALHDRLKADRGRNVRAAHQVMDWVSLFAIAVNEENAAGGRVVTAPTNGAAGIVPAVLRYYREFCDASEAGADDFLLTAAAIGTLFKLNASISGAEVGCQGEVGVAASMAAAGLAAALGGSNEQIENAAEIGMEHHLGMTCDPIGGLVQIPCIERNAFGANKAIAAASLALHGDGTHKVSLDQVVATMRATGADMQSKYKETSQGGLAVNAVEC*