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berkeley_reactor_200306_biofilm_scaffold_111575_37

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(35301..36350)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9C9 similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 339.0
  • Bit_score: 432
  • Evalue 2.70e-118
bile acid:sodium symporter similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 344.0
  • Bit_score: 432
  • Evalue 9.90e-119
Bile acid:sodium symporter {ECO:0000313|EMBL:ACK52599.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 344.0
  • Bit_score: 432
  • Evalue 4.90e-118

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Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGCCCTTTCGCAGCCTGCTGTCACGCCTCGGCATCGATCCCTATCTCATCGCGCTTATCGCGACCGTCGGCCTCGCCGCCGCCCTCCCCGCCCGCGGCGTGGCGGCGGTGGCGGTCGACCATGCCGTCACCGCAGCGGTCGCCCTGCTGTTCTTCCTCTATGGCGCGCGGCTCTCCAGCCGCGCCGTGATCGAGGGCCTGGCCCATTGGCGCCTGCAGGCCCTGGTCTTCGCCAGCACCTTCGTGCTGTTCCCGCTTGTCGGCCTGGCGCTGACCACGGCGCTGCGGCCCTTCCTGTCGGCCGACCTCGCCCTCGGCCTGATGTTCGTCTGCGTGCTGCCCTCGACCGTGCAGTCCTCGATCGCCTTCACCTCGATCGCCCGCGGCAACGTGCCGGCAGCGCTGTGCAGCGCCTCGCTGTCGAACCTGATCGGCATGGTGATGACGCCGGCCCTGGTGGCCCTGCTGCTGAGCACCCACGGCGCCGGCTTCAGCGGCCAGGCGCTCGTCGACATCGCGCTGCAGATCCTGGCCCCCTTCGCCGCCGGCCAGCTGGCGCAGCGCTGGATCGGCCCCTGGCTGACGCGCCACCGCGCCCTGACCGCCTTCGTCGACCGCGGCTCGATCCTGCTGGTGGTCTATGCCGCCTTCAGCGAGGGCATGGTCGCCGGCGTCTGGGCAAGCCTCGGCCTCGGCGAGCTCGCCACCGTGCTGGGGCTCGATGTCGTGATGCTGGGGCTGGTGCTGATCCTCACCACCGCGGCCCGCCGGCGGCTCGGCTTCTCGCGGGAGGACGAGATCGCCATCGTGTTCTGCGGCTCGAAGAAGAGCATGGCGAGCGGCATCCCGATGGCCAACATCCTGTTCGCCGGCCAGCCGCTCGGCCTGATCGTCCTGCCGCTGATGCTGTTCCATCAGGCCCAGCTCTTCGCCTGCGCCACGCTGGCCCAGCGCTATGCCCGGCGTGCCGCGGCGACGAGCAGCCCCGCCACCCATGGCGCGCGCCCGGCGAACGGGCCGGAGTCGACGCTGGCGGCCCGCGCCGGATGA
PROTEIN sequence
Length: 350
MPFRSLLSRLGIDPYLIALIATVGLAAALPARGVAAVAVDHAVTAAVALLFFLYGARLSSRAVIEGLAHWRLQALVFASTFVLFPLVGLALTTALRPFLSADLALGLMFVCVLPSTVQSSIAFTSIARGNVPAALCSASLSNLIGMVMTPALVALLLSTHGAGFSGQALVDIALQILAPFAAGQLAQRWIGPWLTRHRALTAFVDRGSILLVVYAAFSEGMVAGVWASLGLGELATVLGLDVVMLGLVLILTTAARRRLGFSREDEIAIVFCGSKKSMASGIPMANILFAGQPLGLIVLPLMLFHQAQLFACATLAQRYARRAAATSSPATHGARPANGPESTLAARAG*