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berkeley_reactor_200306_biofilm_scaffold_111575_75

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(74844..75452)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D06877 related cluster n=1 Tax=unknown RepID=UPI0003D06877 similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 190.0
  • Bit_score: 276
  • Evalue 1.90e-71
TetR family transcriptional regulator {ECO:0000313|EMBL:ESZ19530.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 190.0
  • Bit_score: 276
  • Evalue 2.60e-71
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 193.0
  • Bit_score: 259
  • Evalue 5.10e-67

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Taxonomy

Mesorhizobium sp. L48C026A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGAGGATGTCTGCGCCGCCAAGGCTCGCCCGCGTGACCGCATCGTCGACACGGCCTGCGAGCTGTTCCGCAAGCATGGATTGAGGGGCATCGGCGTCGATGCCATCGCCGAGGCTGCGGGCACCAACAAGATGACGCTCTACCGTCATTTCGGCTCCAAGGACGTGCTCATCGTCGAGTGCCTGCGCGGCGTGGCGGCCCGCGCCGAGGCGATGTGGGTCGAGCTGGAGGCCGAGCATCCCGGCAATCCCCTGGCCCAGCTCCATGCCTGGGTGCAGCGCGGCGCCGAATGCGCCCTCACCGACGGGCGCGGCTGCGATCTCGCCAACGCCGCCATCGAGCTGCCCGAGGGCGATCATCCCGCCCGCCGGGTGATCGAGGGCTTCAAGACGGCGCAACGCGACCGCCTCGCGGGCCTTTGCCGCAAAGCCGGCATCCGGCAGGCCGATCTCCTCGCCGATGCCCTCTCGCTCCTGCTCGAGGGCGCCCGGGTCAGCCGCCAGAGCGTCGGGCCGGAAGGACCGAGCGCCCGTTTCGTGCGCGTCGGCGAGGCCGTGATCACCTCCTTCGCCAGGACGCCGGAGAGAGCGCCGGAGCCCGTGGCCTGA
PROTEIN sequence
Length: 203
MEDVCAAKARPRDRIVDTACELFRKHGLRGIGVDAIAEAAGTNKMTLYRHFGSKDVLIVECLRGVAARAEAMWVELEAEHPGNPLAQLHAWVQRGAECALTDGRGCDLANAAIELPEGDHPARRVIEGFKTAQRDRLAGLCRKAGIRQADLLADALSLLLEGARVSRQSVGPEGPSARFVRVGEAVITSFARTPERAPEPVA*