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berkeley_reactor_200306_biofilm_scaffold_111575_108

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(113891..115378)

Top 3 Functional Annotations

Value Algorithm Source
Peptidase Do n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IHW4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 505.0
  • Bit_score: 607
  • Evalue 1.10e-170
Peptidase Do {ECO:0000313|EMBL:ERF83325.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 505.0
  • Bit_score: 607
  • Evalue 1.60e-170
peptidase S1C, Do similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 503.0
  • Bit_score: 600
  • Evalue 2.30e-169

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1488
ATGCCTGATCTCTCCAAGACCCTGATGCGCCGGGCCGGTGCCGCCGCCCTCGCCGCCGTCCTGGCCGCCGCCCCCATGGCGATCCTGGCGACCGGCCCCGCGGTCGCCGCGGCCGGGCCCCCCTCCGTCGCCGACCTCGCCTCCCAGCTGATCGACAGCGTCGTCAACATCTCGACGACCCAGACCGTGGGCGGCGGCGGCGACGACGGCCCCGCCCCGCAGATGCCGCAACTGCCGCCGGGCACGCCGTTCGAGGACTTCTTCAACGAGTTCTTCAAGAACCGGAAGGGCGAGGCGCCCCGGCCGCACAAGACCTCGTCGCTCGGCTCGGGCTTCATCGTCGATGCCTCCGGCATCATCGTCACCAACAACCACGTGATCGACGGCGCCGACGACATCGAGGTCAACTTCAACGACGGCACCAAGCTCAGCGCCAAGCTGATCGGCCGCGACAAGAAGGTCGACCTGGCGGTGCTGAAGGTCGAGCCGACCAAGCCGCTGAAGGCGGTCAAGTTCGCCGACAGCGACAAGACCCGCGTCGGCGACTGGGTGCTGGCCATCGGCAACCCGTTCGGGCTGGGCGGCACGGTGACGCTCGGCATCGTCTCGGCCAACAACCGCGACATCAATTCCGGGCCCTACGACAACTACATCCAGACCGACGCCGCCATCAATCGCGGCAATTCCGGCGGACCGCTGTTCGACATGGACGGCAACGTGGTCGGCATCAACACCGCCATCATCTCGCCGACCGGCGGCTCGATCGGCATCGGCTTCTCCGTGCCCGCCTCGACCGCGGCGCCGGTCGTCGACCAGCTGCGCAAATATGGCGAGACCCGCCGCGGCTGGCTCGGCGTCAAGATCCAGCAGGTCACCGACGACATCGCCGAAAGCTTGGGGATGGACCAGGCCAAGGGCGCGCTGGTCGCCGGCGTCGACGACAAGGGCCCGGCCAAGCCGGCGGGCCTGGCGCCCGGCGACGTCATCCTCAAGTTCGACGGCAAGAACATCCGCGAAATGCGCGACCTGCCGCGCATCGTCGCCGATACGCCGGTGGACAAGGAGGTCGAGGTCGTGATCCTGCGCAACGGCCAGGAGATCACCAAGACCGTGCGGATCCAGCGCCTCGACGAGGGCGAGACGCCGCAGAAGGCCAACGCCCAGCCCGTCGAGCCGGAGAAGCCGCCGGTCACCAAGGCGCTCGGGCTGGAAATGTCCGGCATCACCAAGGAGATGCGCGACAAGTACAAGCTCGCCGACGACGCCAAGGGCGTGGTGGTGACCAGCGTCGAGAACGGCTCACCGGCCGACGACAAGCAGATCAAGGCCGGCGACGTCATCGTCCAGGTCGGACAGCAGGTGGTCAACTCGCCCGCCGACGTCTCCGCCCGTCTCGACGATCTGAAGAAGAACGGCACGAAACAGGCGCTGCTGCTCCTGTCCAACGGCCAGGGCGAGCTGCGCTTCGTGGCCCTGGCGCTGCAGTAG
PROTEIN sequence
Length: 496
MPDLSKTLMRRAGAAALAAVLAAAPMAILATGPAVAAAGPPSVADLASQLIDSVVNISTTQTVGGGGDDGPAPQMPQLPPGTPFEDFFNEFFKNRKGEAPRPHKTSSLGSGFIVDASGIIVTNNHVIDGADDIEVNFNDGTKLSAKLIGRDKKVDLAVLKVEPTKPLKAVKFADSDKTRVGDWVLAIGNPFGLGGTVTLGIVSANNRDINSGPYDNYIQTDAAINRGNSGGPLFDMDGNVVGINTAIISPTGGSIGIGFSVPASTAAPVVDQLRKYGETRRGWLGVKIQQVTDDIAESLGMDQAKGALVAGVDDKGPAKPAGLAPGDVILKFDGKNIREMRDLPRIVADTPVDKEVEVVILRNGQEITKTVRIQRLDEGETPQKANAQPVEPEKPPVTKALGLEMSGITKEMRDKYKLADDAKGVVVTSVENGSPADDKQIKAGDVIVQVGQQVVNSPADVSARLDDLKKNGTKQALLLLSNGQGELRFVALALQ*