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berkeley_reactor_200306_biofilm_scaffold_111575_116

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 122655..123203

Top 3 Functional Annotations

Value Algorithm Source
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 161.0
  • Bit_score: 187
  • Evalue 1.40e-44
dihydrofolate reductase (EC:1.5.1.3) similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 165.0
  • Bit_score: 183
  • Evalue 5.40e-44
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002E0ED76 similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 165.0
  • Bit_score: 188
  • Evalue 4.60e-45

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Taxonomy

Oceanibaculum indicum → Oceanibaculum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGACGGCGCCGGCCGCGGTTCTCGCCGGTGACGAGGCCGATCCCCTGCCGATCGTGATGGTGGCGGCCATGGCCCGCAACGGCGTCATCGGCGTCGACAACGGCCTGCCCTGGCACATGCGCTCGGATCTCAAGCATTTCCGGGCCGCCACCTGGGGCAAGCCGATGATCATGGGCCGCAAGACCTATCAGTCGATCGGCCGGCCGCTGCCGGGGCGCGAGACCGTCGTGGTGACGCGTGACCCGGCCTTCGCGGCCGAGGGCGTGCATGTCGTCGACGGGCTCGACGCCGCCTTCGCGCTGGCGGCGATGCTGGCCCGGACCAGCGGTGCCGAGGAGATCATCGTCGCGGGCGGCGCCACCATCTATGCCGAGGCGATGAAGCGGGCCGACAGGCTGGTGATCACCGAGATCCAGCTCGAGGCGGAGGGCGATGCCGTGTTCCCGCCGATCGATCCCCTGCAATGGCTGCAGGCCTCGCGCACCGCCTACCCCCGCGGGGAGAAGGACGATGCGGCCTATGACGTGGTGGTCTGGCAGCGCCGCTGA
PROTEIN sequence
Length: 183
MTAPAAVLAGDEADPLPIVMVAAMARNGVIGVDNGLPWHMRSDLKHFRAATWGKPMIMGRKTYQSIGRPLPGRETVVVTRDPAFAAEGVHVVDGLDAAFALAAMLARTSGAEEIIVAGGATIYAEAMKRADRLVITEIQLEAEGDAVFPPIDPLQWLQASRTAYPRGEKDDAAYDVVVWQRR*