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berkeley_reactor_200306_biofilm_scaffold_115287_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 12263..13201

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003764F2F similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 301.0
  • Bit_score: 252
  • Evalue 4.40e-64
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 298.0
  • Bit_score: 228
  • Evalue 1.50e-57
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEQ53689.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 298.0
  • Bit_score: 228
  • Evalue 7.40e-57

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Taxonomy

Pelagibacterium halotolerans → Pelagibacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGACGCCGACCAGCTCCGGACCTTCGACCGCGTGGTGCGCGAGGGCTCGTTCACCAAGGCCGCCGCCGCGCTGAACGTGACGCAGGGCACGGTGTCGATGCGCATCGCCGCGCTGGAGCAGCGCCTGGGCGGACCGCTCTTCAGCCGCGGGCGGCGCATCGAGCTCACCGAGCGCGGCCAGGGCTTCCTGCCCTATGCCCGCCGCGCCCTGGCGCAGATGATGGAGGGCATCGAGGCGGCACGGGTGGCGGACCGCGGCGAACGCGGGCTGCTCTGCCTGGCGACGCTGCGCTCCCATGCCGAGACCGTGGTCGGCCAGGCGCTCGGCCGCTTCCTCAAGCGCTTCCCGGGCGTCGAGGTGAAGGTGCGCGAAGGCCATCACCACGACACGATCGAGATGCTGCACGACCGGGCGGTCGACATCGCCATCACCGGCTGGCCGAATCTCGACCCGCTGCTCGACGATCCCGCCCCGGCGCTGATCCTGCGCGAGGACCTGGTGGTGGTGGCCGCCCCGGCGCTGGTCGGTGAGCGCCGCCGCTTCACCGCGGCGGAGATCGGCGCCCTCGGCGAGGTGGCGATCGTGCAGCGCTGGTGGCAGGTGATGCCCGATGCGATCGACATGCTGGTGCCGCGCGACCGCCCGGCCTACGACCTGCCGATGCAGCTCGCCCTGCCGCTGGTGCGCGAGGGACGCGCCGCCGCCAATTTCCCCCGCCACTCCATCGCAGCGGAGCTGGAGGCGGGACGCCTGGTGGCGCTCGATGTGTCGGACATGCCGCCGATCCGGCGCGACAGCGCCCTGGTGGCGCTGAAGCCCGAGACGTGGTCGACCCCGATCGCCGCCAATTTCGCCCGCGAGCTGGCCGCCGCCGCCCGCGAGCTGGGGCTCGGCGTCAAGGCGACCGGCAGCATCCGGCTGATGGAAGCGGCCTGA
PROTEIN sequence
Length: 313
MDADQLRTFDRVVREGSFTKAAAALNVTQGTVSMRIAALEQRLGGPLFSRGRRIELTERGQGFLPYARRALAQMMEGIEAARVADRGERGLLCLATLRSHAETVVGQALGRFLKRFPGVEVKVREGHHHDTIEMLHDRAVDIAITGWPNLDPLLDDPAPALILREDLVVVAAPALVGERRRFTAAEIGALGEVAIVQRWWQVMPDAIDMLVPRDRPAYDLPMQLALPLVREGRAAANFPRHSIAAELEAGRLVALDVSDMPPIRRDSALVALKPETWSTPIAANFARELAAAARELGLGVKATGSIRLMEAA*