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berkeley_reactor_200306_biofilm_scaffold_115287_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 15444..16118

Top 3 Functional Annotations

Value Algorithm Source
Putative periplasmic ligand-binding sensor protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QME3_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 266.0
  • Bit_score: 141
  • Evalue 7.90e-31
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 273.0
  • Bit_score: 137
  • Evalue 2.50e-30
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDR90253.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 259.0
  • Bit_score: 137
  • Evalue 1.20e-29

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGACCCCGAACGAGAAATCCCTCATCGAGGATCTGTTCAACCGCATCCGCGCGACACAGCTGCCGCAGCGGGACGCGGAAGCCGACCAGCTCATCGCCGCGGAGATGGCCAAGACGCCGGCCGCCGCCTATGTGCTGGCCCAGACCGTGCTGGTGCAGGACCAGGCGCTGCGCGAGGCGCACGAGCGCATCAAGGCGGCCGAGGCCGCGGCGCAACAGGCCCAGCAGCCCCAAGCCCAGCCCCAGAGCCAGGGCTCCTTCCTCGACCGCTTCGGCGGCGGGGGCGCGAGCCAGGGCGCCGTGCCGCGCACCGGCCCGGCCGATGCGCCCACGGCCCAGGCCGGGGGCGGAGGCGGAGGCTTCATGCGCGGCGCGCTGACGACGGCGGCCGGCGTCGCGGGCGGGGCGCTGCTGTTCGAGGGCGTGCGCTCGCTCTTCGGCGGCGGGGGCGGCCTGCTCGGCGGCGGCGGCCTGTTCGGCGGCGGCAATGCCGGCGGCTCCTTCCTCGGCGGCCCCTGGGGCGGCCAGCCGGAGACCGTGGTCAACGAGACCATCATCAACGAGAATCCGGGCGACAACGATGCCGGGCCGGACCTTGCCAGCTACGACGACACCGATTCCGACGGCGACTGGTCCGACGACGGCTCGGACGACAGCGGCGACAGCTACGCCTGA
PROTEIN sequence
Length: 225
MTPNEKSLIEDLFNRIRATQLPQRDAEADQLIAAEMAKTPAAAYVLAQTVLVQDQALREAHERIKAAEAAAQQAQQPQAQPQSQGSFLDRFGGGGASQGAVPRTGPADAPTAQAGGGGGGFMRGALTTAAGVAGGALLFEGVRSLFGGGGGLLGGGGLFGGGNAGGSFLGGPWGGQPETVVNETIINENPGDNDAGPDLASYDDTDSDGDWSDDGSDDSGDSYA*