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berkeley_reactor_200306_biofilm_scaffold_115287_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(18129..19712)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BE72 similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 524.0
  • Bit_score: 590
  • Evalue 1.20e-165
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KCZ92709.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 524.0
  • Bit_score: 629
  • Evalue 2.40e-177
ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 524.0
  • Bit_score: 570
  • Evalue 2.70e-160

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Taxonomy

Hyphomonas johnsonii → Hyphomonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1584
ATGACCGCCCTGCTCACGCTGGAGTCCGTCGCCCTCGTCACCCCTGACGGCCAACCGCTGTTCGACGGCCTGACGCTCGCTCTCGGCCGGGAACGGCTGGGTCTCGTCGGCCGCAACGGCAGCGGAAAGTCCACCCTGCTGCGTCTGATCGCGGGCGAGATCGAGCCGGCGGCCGGCACGGTGTGGCGGGCGGGCTCGGTCGGAATGCTCGTACAGGCGGCCGACGACTCCCTGACCGTCGCCGATGCGTTGGGCGTCGCCGGCGCCTTCGCGCGCCTGCGCCGTCTCGAAGACGGCGTCGGCTCCCTCGACGATGCCGCCGAGGCCGACTGGAGCGTGCCCTCGCGGGTGGAGGCGGCGTTGACCGAGAGCGGCCTGCCGACCCTGCCTCTCGACAGGACCATCGCTTCTCTCAGCGGCGGCGAGCGCACGCGGATCGCCATCGCCCGCCTGTCGATCCAGGCGCCGGACATTCTGCTGCTGGACGAGCCGACCAACAATCTCGATGCCGAGGGACGGATGATCCTGCATCGGCTCATGGAGGGTTGGAGGGGCGGGATCATCGTCGCCAGCCATGACCGCGCCGTGCTCGGTGGGGTGGACCGGATCGTCGCGCTTTCCCCGGTCGGGGTCACGGTGTTCGGCGGCTCCTGGGCCGGCTTCGCCGAAGCGCGCGATGCCGCCAACGCCCGCGTCGAGGCCGAGGTCGACAGGGCCGGGCAGGCCCTGAAGCGCACGGCGCGCGATGTGCAGAAGGCGAGGGAGCGGCAGGACCGCCGCGACAGTTCGGGGCGCGCCAAGCGGGCCAGGGGCGACGCTCCGAAGATCCTGAGCGATGCCCAGGCCGAACGCGCGGAGCACAGCGCCGCGCGCGGCAGCCATCTGGCCGACCGCGTGCTGGCTGACCGGGCGCAGGCGCTGGAGACCGCTCGGGCTCGCCTCGAGGTGCTCACTCCCCTCGCGATCGATCTGCCGAAGTCGGATCTGCCGGCCGGGCGGCACTTGCTGTCTCTCCGCGATGTCGTGGTCGCCCAAGACGGCCGGCGCCTGTTCGGGCCTCTGTCCTTCGAGGTGCACGGCCCGGAACGGATTGCTCTCCGCGGCGCGAACGGCTCCGGCAAGACCACGTTGCTGCGTCTCGTCACCGGCGAACTGCTGCCCGCATCGGGCCAGGTTCGCCGCTTGACCGGCCGCATCGCCGTCCTTGACCAGCATGTCGCGATGCTGGACCCGGCGGCGACGATTCTCGACAATCTGCGCCGCCTGAATCCGGGAGTGTCCGTCCATGAGTCCAGGGCGACGCTGGCTCGCTTCGCCTTCCGCAACCAGGCGGCGCTGCAGGTCGCCGGGACGCTCAGCGGCGGCGAGCGCATGCGCGCCGGCCTGGCCTGCGCCTTCGCCGGCCACCCGCCCGAGCTCCTGCTGCTGGACGAGCCGACCAACCACCTGGACCTTGCGTCGATCGAGGTGCTGGAAAACGCCCTTGCGGACTTCGATGGAGCCTTCATCGCCGTGAGCCACGACGAGGCTTTCCTGGACGCGATCGGCGTCCGGCGACGCATCGCACTCCCGGCATCCCGTTGA
PROTEIN sequence
Length: 528
MTALLTLESVALVTPDGQPLFDGLTLALGRERLGLVGRNGSGKSTLLRLIAGEIEPAAGTVWRAGSVGMLVQAADDSLTVADALGVAGAFARLRRLEDGVGSLDDAAEADWSVPSRVEAALTESGLPTLPLDRTIASLSGGERTRIAIARLSIQAPDILLLDEPTNNLDAEGRMILHRLMEGWRGGIIVASHDRAVLGGVDRIVALSPVGVTVFGGSWAGFAEARDAANARVEAEVDRAGQALKRTARDVQKARERQDRRDSSGRAKRARGDAPKILSDAQAERAEHSAARGSHLADRVLADRAQALETARARLEVLTPLAIDLPKSDLPAGRHLLSLRDVVVAQDGRRLFGPLSFEVHGPERIALRGANGSGKTTLLRLVTGELLPASGQVRRLTGRIAVLDQHVAMLDPAATILDNLRRLNPGVSVHESRATLARFAFRNQAALQVAGTLSGGERMRAGLACAFAGHPPELLLLDEPTNHLDLASIEVLENALADFDGAFIAVSHDEAFLDAIGVRRRIALPASR*