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berkeley_reactor_200306_biofilm_scaffold_115287_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 27606..28232

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000363830D similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 210.0
  • Bit_score: 172
  • Evalue 2.30e-40
Transcriptional regulatory protein {ECO:0000313|EMBL:KFC67119.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 194.0
  • Bit_score: 171
  • Evalue 9.30e-40
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 196.0
  • Bit_score: 167
  • Evalue 2.70e-39

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGGACGACACGGAGCGGGCGGCAGCGGGCGGTCGCGCCTATCATCACGGCGACCTGCGCCATGTCCTGATCGAGACCGCCGAGCAGCTGCTGACCGAGCGCGGCGTCGAGGGTTTCTCGCTGCGGGAATGCGCCCGGCGGGCGGGGGTGTCGCCGGCGGCGCCGGCCCACCATTTCGGCAATGTCACCGGCCTGCTCACCGCCATCGCCACGCTCGGCTTCGAGGGCCTGTGCCGGGCGATGGAGGACGCGGCCGCCGCCGGCGCAACGCCCACGGCGCGGCTGCGGGGGCTCGGGCGCGGCTATATCCGCTATGCCCTCGAGCACCCTGCCCGCTTCCGGGTGATGTTCGGGCGCTTTCCCCTCGAGCGCGGCGACCCCGCCCTGGCGCAGGCCGGCCAGCGCGCCTTCGGCCTGCTCGCCACGGCGAACGAGGCCCTGCCCGGCCGGGGCGGCGACGCCTCTTCCCTGGTGCTCGCCTGGTCGGCGGTGCACGGCTTCGCCACGCTGGCGCTCGACGGACAGATGCCGTTCGTCGACGGGCAGCCCGACCGGGCGGCGGCGATCGACCGCCTCGCCGACGGGATGCTCAGCCTGATCGGCCGCGCGCTGGGCCGAGACAGCTGA
PROTEIN sequence
Length: 209
MDDTERAAAGGRAYHHGDLRHVLIETAEQLLTERGVEGFSLRECARRAGVSPAAPAHHFGNVTGLLTAIATLGFEGLCRAMEDAAAAGATPTARLRGLGRGYIRYALEHPARFRVMFGRFPLERGDPALAQAGQRAFGLLATANEALPGRGGDASSLVLAWSAVHGFATLALDGQMPFVDGQPDRAAAIDRLADGMLSLIGRALGRDS*