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berkeley_reactor_200306_biofilm_scaffold_101524_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(11563..13272)

Top 3 Functional Annotations

Value Algorithm Source
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Methylobacterium sp. GXF4 RepID=I9X011_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 559.0
  • Bit_score: 477
  • Evalue 1.50e-131
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:GAN52286.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 567.0
  • Bit_score: 480
  • Evalue 2.00e-132
methyl-accepting chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 559.0
  • Bit_score: 474
  • Evalue 3.70e-131

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Taxonomy

Methylobacterium sp. ME121 → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1710
ATGGTTCGCTTGGCCCTCCCGAAGCTGCGTCTGCGCCTGACGATCGCCCATAAGCTGGGCGCCCTCCTGGCCCTCCTGGTGCTCCTGGCCGCGGGCCTGTCGGCCTTCGCCCTGCGCCAGCTCGCGGAGGAGCAGGACCGTTCGGACGCCGTCGAGAAGGTCATGACCCTGGCGCTCCAGGCCCGCACGCTCGGCCAGGCGATTGAGCATGCCGTGGTCGCCGCCAACACCGTGTACACCGCCGAGGACAAGGAGGGGGCCAAGGCCGGATTCGAGGGGCTGCGCACCGCCCTCGATGCGGTGAAGGTCCAGGGCGACACCTTCATCGCGGCAGCCGGCGACCGCATCCCCGAGGCGGGGCGGCGCAAGCTCGACCGGTCGCTGAAGGAGTTCATCGCCTATCAGAGCGAGACCGCCGACATGGGCCTGACCATCTCGCCGAAGGCGGCCCTGCTCCAGGCCAGCGAGCCCGGCACGGTGGCGAGCCGCAACACCATGCTGAAGGACATCGCCGAGCTCGCCGGCACCTTCATCGCCGATGTCGAGCGCCAGCGCGGCGAGGCCGCCGCCGCGCGCCGCCGCGCCTTCGCCGCCTTCACGGTCGTGCCCGCTTCCGCCACCGGCATCGCGCTCCTCGCCGGGATCTGGCTGATCGTCAGCCAGATCCGCCGCCCGCTGCAGCGCCTGAGCACCGCCATGCGGGCGCTGGCGAACCAGGACCTCGATGCCGAGGTGCCCTTCACCGCCCGCCGCGACGACATCGGCGACATGGCGCGTGCCATCGGCGTGTTCCAGGCCGCGCTCAAGGAGCGCCGGCGGCTGGACGCCGACCGTCAGGGGACCCTCGCGGCCGAGGCGGCGCGGGCGGAGCGGCTGGCGGCCGGCAGCCGGGCCTTCCAGGAGGAGGTGCGGCGCATCATGGAGGGGCTGCAGACCTCCGCCGCGACGCTGGAGGCCTCGGCCGGCGCCCTGTCCGCCGCCTCGCTGGCGACCCGGGCGGAGGCCGAGATCGTGGCCCAGTCCTCGGCGACAGCGGCGCAGGCGGTCGAGGCCGCGGCCGGCGCCACGACGCAGCTCTCCGGCTCGACCCACGAGATCGGCGCCCGGGTGGCGACGGCCAGCGAGATGGCGACCGGCGCCCTGGGCGAGGCCCGCGGCACGGCGTCCGCGGTGGAATCCCTGGTTGCCGCCGCGGCCGAGATCGGCACCGTCGCCTCGCTCATCCGCGGCATCGCCCAGCAGACCAACCTGCTCGCCCTCAACGCGACGATCGAGGCGGCCCGGGCCGGCGAAGCCGGGCGCGGCTTCGCCGTGGTGGCCGCGGAGGTCAAGGCCCTCGCCCAGCAGACCGCCGGCGCCACCGACCAGATCACCGCCCTCATCGCCGCCATCCAGGCGGCGACGCAGAACACGCGGCAGGCCATGCTCGCCGTCGGCCAGGCGATCGAGGCGATGAGCGCCATCACCGCCGAGATCTCGGGCGCCGCGGTGCAGCAGCGCCAGGCGAGCGACGAGATCGCCACGGCGGTCTCGCACGCGGCGCGGGAGGCCGGCACCGTCGCCGCGACGATCCAGCGGGTGCGGGACGCGGCGCTCTCCAACGAGGCCCAGGCCGAAGGCGTGCGCGACGCCGGCGGCAAGCTGTCCGAGCACACCCGCGTGCTGCAGGACGCGGTGGCCGAGTTCCTGTCCCAGGTGCGGGCGGCGTGA
PROTEIN sequence
Length: 570
MVRLALPKLRLRLTIAHKLGALLALLVLLAAGLSAFALRQLAEEQDRSDAVEKVMTLALQARTLGQAIEHAVVAANTVYTAEDKEGAKAGFEGLRTALDAVKVQGDTFIAAAGDRIPEAGRRKLDRSLKEFIAYQSETADMGLTISPKAALLQASEPGTVASRNTMLKDIAELAGTFIADVERQRGEAAAARRRAFAAFTVVPASATGIALLAGIWLIVSQIRRPLQRLSTAMRALANQDLDAEVPFTARRDDIGDMARAIGVFQAALKERRRLDADRQGTLAAEAARAERLAAGSRAFQEEVRRIMEGLQTSAATLEASAGALSAASLATRAEAEIVAQSSATAAQAVEAAAGATTQLSGSTHEIGARVATASEMATGALGEARGTASAVESLVAAAAEIGTVASLIRGIAQQTNLLALNATIEAARAGEAGRGFAVVAAEVKALAQQTAGATDQITALIAAIQAATQNTRQAMLAVGQAIEAMSAITAEISGAAVQQRQASDEIATAVSHAAREAGTVAATIQRVRDAALSNEAQAEGVRDAGGKLSEHTRVLQDAVAEFLSQVRAA*