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berkeley_reactor_200306_biofilm_scaffold_101524_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(20789..20962)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Methyloferula stellata RepID=UPI0003743D04 similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 57.0
  • Bit_score: 88
  • Evalue 1.50e-15
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 57.0
  • Bit_score: 85
  • Evalue 4.80e-15
UPF0391 membrane protein Rpal_3821 {ECO:0000256|HAMAP-Rule:MF_01361}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 57.0
  • Bit_score: 85
  • Evalue 2.40e-14

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 174
ATGCTCAAATGGGCCCTCATCTTCTTCGTGATCTCGCTGGTCGCCGGCGCGCTCGGCTTCTCCGGCATTTCCGCCGGCGCGGCGCAGATCGCCAAGATCCTGTTCTTCCTCTTCCTCGCCGTCTTCGTGATCTTCCTCATCCTCGGCTTGATGGCGGGCCAGGCCCTGTTCTGA
PROTEIN sequence
Length: 58
MLKWALIFFVISLVAGALGFSGISAGAAQIAKILFFLFLAVFVIFLILGLMAGQALF*