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berkeley_reactor_200306_biofilm_scaffold_116766_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(8943..9776)

Top 3 Functional Annotations

Value Algorithm Source
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 276.0
  • Bit_score: 448
  • Evalue 4.00e-123
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55) similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 275.0
  • Bit_score: 444
  • Evalue 1.50e-122
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMJ9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 276.0
  • Bit_score: 448
  • Evalue 2.90e-123

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGTCCCCCAACTCCGTGGTCTCCATCGGCGACATCCGCATCGGCAACACCCTGCCGCTGACGTTGATCGCGGGCCCCTGCCAGATGGAGAGCCGGGCGCACGCCCTGGAGATGGCGAGCGCCATCAAGGAGATCGCGGCGCGGGTCGGCCTCGGCCTGATCTACAAGACCTCCTTCGACAAGGCCAACCGCACCTCCTCGAGCGGGGCGCGCGGGCTCGGGCTCGCCAAGGCGCTGCCGGTCTTCGCCGAGGTGCGCGACAGCCTCGGCCTGGCGACGCTGACCGACGTGCACGAGATCGACCAGTGCGCCGCGGTGGCCGAGGCCGTCGACGTGCTGCAGATCCCGGCCTTCCTGTGCCGGCAGACCGACCTGCTCGTGGCGGCCGCCCGCACGGGCCGGACGGTCAATGTCAAGAAGGGCCAGTTCCTGGCGCCCTGGGACATGGCCAATGTGGTGGCCAAGATCACCGATGCCGGCAATCCCAACGTGCTGGTCACCGAGCGCGGCGCCTCCTTCGGCTATAACACCCTGGTCTCCGACATGCGGGCCCTGCCGATCATGGCCGAGACCACCGGCGCGCCTGTCGTGTTCGACGCCACCCATTCCGTGCAGCAGCCCGGCGGCAAGGGCTCGTCCTCCGGCGGCCAGCGCGAATTCGTGCCGGTGCTGGCCCGGGCGGCGGTGGCGGTCGGCGTCGCGGCGGTGTTCATCGAGACCCACCAGGATCCGGACAACGCGCCCTCGGACGGGCCGAACATGGTGCCGCTGCGCGAGCTGGAAGCCTTGCTTCGCCGGCTGAGGTGTTTCGACGACCTCGCCAAGGGGGCCTGA
PROTEIN sequence
Length: 278
MSPNSVVSIGDIRIGNTLPLTLIAGPCQMESRAHALEMASAIKEIAARVGLGLIYKTSFDKANRTSSSGARGLGLAKALPVFAEVRDSLGLATLTDVHEIDQCAAVAEAVDVLQIPAFLCRQTDLLVAAARTGRTVNVKKGQFLAPWDMANVVAKITDAGNPNVLVTERGASFGYNTLVSDMRALPIMAETTGAPVVFDATHSVQQPGGKGSSSGGQREFVPVLARAAVAVGVAAVFIETHQDPDNAPSDGPNMVPLRELEALLRRLRCFDDLAKGA*