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berkeley_reactor_200306_biofilm_scaffold_116766_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(10812..11990)

Top 3 Functional Annotations

Value Algorithm Source
Citrate synthase (si) (EC:2.3.3.1) similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 390.0
  • Bit_score: 429
  • Evalue 5.50e-118
Citrate synthase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EJ47_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 393.0
  • Bit_score: 431
  • Evalue 6.70e-118
Excisionase {ECO:0000313|EMBL:KDP88884.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 393.0
  • Bit_score: 436
  • Evalue 2.20e-119

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Taxonomy

Cupriavidus sp. SK-3 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
TTGAGCGCCTCCCTTTCCTCCGAGGAGGCGGCGCGGCGTCTCGGCGTGACGCGCCAGACCCTCTATGCCTATGTCAGCCGCGGGCTGATCGCCGCGCTGCCCGGCACGGACCAGCGCGAGCGGTGCTATTCCGCCGAGGCGATCGAGCAGTTCGCCGCCAGCCGGCATCGCGGCCGCCGGCCGCAGGAGATCGCCCGCACCACGCTCGACTGGGGCTTGCCGGTGCTGGAATCCGGCATCACCCTGATCGAGGACGGACGCCTCTACTATCGCGGCGAGGATGCGCTGGCCCTCGCCCGCGCCGGCACGTTGGAGACGGTGGCGCCGCTGCTCTGGCACTTGCCGGGCGCGGAGGCCTTTGCGCCGACGCCGCCGCCCGCCGCGCCGGCCTTCCTCGACCTCGTCGGCCGCCATCCCGGTCCGGCCTTCCGCGCCGGGCTGCTGGCACGCTTTGCGCTGGCGGTGGAAGAGGACGACACGACCTGGCAGCAGGACCGCGCCCGCCTCGCCGCCGGCAGCGGGGCGCTGGTGCGGCTCTTGCTCGCCGCCATGCTCGGGCGGCCGCCCTCGGCGGCGGCGCTGCACCGGCAATGCGCCGAGTCCTGGCGGCTCGACGAGGCCGGGGCGGATCTCGTGCGCATGGCGCTGGTGCTCTGTGCCGACCACGAGCTCAATGCGTCCGGCTTCACCGCCCGCTGCATCGCCTCGACCGGCGCCGGCCTGCATGCCGCCATCATCGGCGGCCTCGCCGCCCTCTCCGGCCCGCGCCACGGCGGCATGACCGTCCGCGTCGAGGCGCAATGGCGCGGCTTCGAGGGCGCGGCCGATCCGATGCCGGCGCTGCGCGGCCTGCTGGCCGGCGGCGGCGACATCGCCGGCTTCGGCCATCCGCTCTATCCCGCCGGCGATATCCGCGCGGCCGCCATCCTCGACGGGGTCCGGCACCGCCTGCCCGGCCTCGACGCGCTCGTCGCGGCGGTGTTCGACCTCACCGGCCGCCGGCCCTCGCTCGACTTCGCGCTGGTGGCGCTGCGCCGGGCGCTCGGCCTGCCGGAGGGCGCGGCCTTCGGCCTGTTCGCCCTCGGCCGCTCGGTCGGCTGGATCGCCCAGGCCCTGGAGCAGCGCGAAAGCGGCGGCCTGATCCGGCCGCGGGCGACCTATACCGGCCCGCGGCCTTGA
PROTEIN sequence
Length: 393
LSASLSSEEAARRLGVTRQTLYAYVSRGLIAALPGTDQRERCYSAEAIEQFAASRHRGRRPQEIARTTLDWGLPVLESGITLIEDGRLYYRGEDALALARAGTLETVAPLLWHLPGAEAFAPTPPPAAPAFLDLVGRHPGPAFRAGLLARFALAVEEDDTTWQQDRARLAAGSGALVRLLLAAMLGRPPSAAALHRQCAESWRLDEAGADLVRMALVLCADHELNASGFTARCIASTGAGLHAAIIGGLAALSGPRHGGMTVRVEAQWRGFEGAADPMPALRGLLAGGGDIAGFGHPLYPAGDIRAAAILDGVRHRLPGLDALVAAVFDLTGRRPSLDFALVALRRALGLPEGAAFGLFALGRSVGWIAQALEQRESGGLIRPRATYTGPRP*