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berkeley_reactor_200306_biofilm_scaffold_116766_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 29784..30902

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD family protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8P2_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 343.0
  • Bit_score: 502
  • Evalue 2.90e-139
secretion protein HlyD family protein similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 343.0
  • Bit_score: 502
  • Evalue 8.30e-140
Secretion protein HlyD family protein {ECO:0000313|EMBL:CCB63620.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 343.0
  • Bit_score: 502
  • Evalue 4.10e-139

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGACCGACGTGGCGGAGAAGCAGGCAGTGGCCGGGGCCTCCGGGACAATCCCATGGACCCGATGGCTCTATCCAGCCCTGCGCGTCGCCTTTCTCATCGTCGCGGCCTGGCTGGTCTGGTATGTCGCCGGGCATTGGAACCGATGGACCGGCTCGGCCCGATTTGCCACCACGGACGATGCGTTCGTGGCGGGCGACGTCACCCCGCTCGCGGCGCACGTGTCGGGCTACATCACCGATGTCGCCGTCGGCGACTACCAGACGGTCCGCAAGAACGATCTCATCGCGCAGATCGATCCATCCGACTATCAGGCGCAGCTCGCCCTGGCCAAGGCCAACCTCGCCGCGGCGCAGGCCTCGCTGGCCAACATCGCCAACCAGAAGGATGTGCAGGCCGCGCTCATCCGCCAGGCCGGCGCCAATATCGAGGCGTCGGACGCGGACCTCGTGCGCTACCAGCTCGAAGCCAAGCGCCAGCGGACGCTCCTGGCCGCGGGCACGGCCGGGACCCAGCAATTCGTCGAGCAGGCGGACGCCAATGCAAGGCGCGCCGCCGCGCAGAAATCGCTGAACGAAGCCCAGCTCGACCAGCAGAAGGCCATCCTCGCCGGCCTCGACATGCAACAGAAGCAGATCGAGGCGCAGATCCAGGCGGCGGAGGCCCAGGTCACGCTGGCGACCAACAACCTCAACTATACCCGCATCGTCTCGCCGGCCGACGGCCTGGTCGGCCAGCGCCAGGTGCGCCCGGGCCAGTTCGTCAATGTCGGGACGCAGATCATCGCCGTGGTGCCGCTGCCGAACGTCTGGGTCGTCGCGAACTACAAGGAAACCCAGATGACCAATGTCCGCGTCGGCCAGGCCGCGCGCGTCGCCGTCGATGCCTTCCCCGACCTCGCGCTGACCGGCCATGTCGAGAGCTGGTCGCCCGGCACCGGCAGCACCTTCGCGCTGCTGCCGCCCGACAACGCCACCGGCAACTTCACCAAGGTCGTGCAGCGCGTGCCCGTCAAGATCGTGCTGGACGCCAACCCGGCGCTCGGCAGCCTGGTGCGGCCCGGATTGTCGGTCGAGGCCACGATCGATACCGGCGACGGCGCCGCGACGGCCAAGCCGTGA
PROTEIN sequence
Length: 373
MTDVAEKQAVAGASGTIPWTRWLYPALRVAFLIVAAWLVWYVAGHWNRWTGSARFATTDDAFVAGDVTPLAAHVSGYITDVAVGDYQTVRKNDLIAQIDPSDYQAQLALAKANLAAAQASLANIANQKDVQAALIRQAGANIEASDADLVRYQLEAKRQRTLLAAGTAGTQQFVEQADANARRAAAQKSLNEAQLDQQKAILAGLDMQQKQIEAQIQAAEAQVTLATNNLNYTRIVSPADGLVGQRQVRPGQFVNVGTQIIAVVPLPNVWVVANYKETQMTNVRVGQAARVAVDAFPDLALTGHVESWSPGTGSTFALLPPDNATGNFTKVVQRVPVKIVLDANPALGSLVRPGLSVEATIDTGDGAATAKP*