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berkeley_reactor_200306_biofilm_scaffold_103592_123

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 119383..120051

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Acidovorax RepID=CLPX_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 142.0
  • Bit_score: 90
  • Evalue 2.10e-15
clpX; ATP-dependent protease ATP-binding subunit clpx similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 142.0
  • Bit_score: 90
  • Evalue 5.90e-16
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000255|HAMAP-Rule:MF_00175}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.6
  • Coverage: 142.0
  • Bit_score: 90
  • Evalue 2.90e-15

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCGCGATTTCCGCGATGCGAAGGCCATGGCGCATGCCCTGCGCGAGGCCCTGAAGGCCAAGGCCGTCGAAACCACCCACAGCGAATGCCTGGAGCTGATCGCCAAGGCGTTCGGCTTCGACAATTGGAACATCCTGTCCGCCAGGATCGACGCGGCGGCGCGCGAGCATTCGCCCGTCGAACAGTCGAGCCCGGCGCCCCGGCGGACCCTGCACTGCTCCTTCTGCGGGAAGAGCCAGCACGACGTGCGCAAGCTGGTTGCCGGGCCCGCCGTGTTCATCTGCGACGAGTGCATCGAGCTGTGCAACGAGTTCGTGGAAGACCCGCTCGGTGACGAGGACCTCGCCCGCCTGATGCAATGGGACGCCGAGACGGCCGGCGCTCTGTCCACCGAAGAACTGGCGCATTACGTGGAGCGCGGCAGGAAGGGCGTGGAGCGCAACCGGCTCACCCTGCAGGGCACCCAGCGAAAACTCGCCCTCAGGGATGGCGAGGTCCCGGCGGACGACGACATCCTGGCGCTGCCCCGCCTGGCCTATCTGAAGACCAGGACACGCGAGGAGCTTCTGGCGCTGCAGCAGGCCGCGCAGTTCCAGCTGAGCCGCCATGAAGAGGCCTTGCGCCTGGCGACGGCCGCGCTGGGTGCACGAAAGCACGAGCAACGATAG
PROTEIN sequence
Length: 223
MRDFRDAKAMAHALREALKAKAVETTHSECLELIAKAFGFDNWNILSARIDAAAREHSPVEQSSPAPRRTLHCSFCGKSQHDVRKLVAGPAVFICDECIELCNEFVEDPLGDEDLARLMQWDAETAGALSTEELAHYVERGRKGVERNRLTLQGTQRKLALRDGEVPADDDILALPRLAYLKTRTREELLALQQAAQFQLSRHEEALRLATAALGARKHEQR*