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berkeley_reactor_200306_biofilm_scaffold_103592_133

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 130870..132567

Top 3 Functional Annotations

Value Algorithm Source
Peptidase C14 caspase catalytic subunit p20 n=2 Tax=Rhodopseudomonas palustris RepID=B3QH78_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 361.0
  • Bit_score: 274
  • Evalue 2.00e-70
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:ETR75015.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 288.0
  • Bit_score: 283
  • Evalue 4.60e-73
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 361.0
  • Bit_score: 274
  • Evalue 5.60e-71

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
ATGCTGCGCCGCCTTCTCATCCCTGCGCTTGCCCTGGTCCTGGCGCCTTTCGCGGCGCAGGCCCGCAGCGTCGCGCTGGTCATCGGCAACGACGCCTATGCCAACGTGCCCAGGCTGCAGAAGGCGGTGAACGATGCCCGTTCGATCAGCACCGAGCTGGAGCGCCTCGGCTTCGTGGTGCGCCGGGTGGAGAATGTCGACCAGCGCAGCATGAGCAAGGCGCTGGTGGCCTTCGACGCCGACATCCAGGCGGGCGACCGGGCGCTGTTCTTCTATTCCGGCCATGGATTCGAGATCGGCGGCACCAACTACCTCCTGCCGACCGACGTGCCGGCCGCGCGCAGCAACGAAGCGGACCTGGTGCGCGATGCCTCCTTCCCGGTCGACCGCATCATCGACGGCATCCGGGAGAAGGGCGCCGGCGTCGCCATCCTGGTGCTCGACGCCTGCCGCGACAATCCCTTCGCCGCGCCGGGCACCCGCTCGACCGCCCAGAGCAGGGGCCTCGCCCGCGTCGACGCGCCCGAGGGCGTGTTCGTGCTGATGTCGGCGGGCCAGAAGCAGGAGGCGCTCGACCGCCTCTCCGACGCCGACGACAACCCCAATTCGGTGTTCACCCGCACCTTCCTCGGCGAGCTCGACAAGGCCGGCCGCACCCTGGTGCAGATCGCCAAGACCACGCAGGTGAAGGTCAAGGACCTCGCCCGCAGCGTCGGCTACGACCAGACGCCGGCCTATTACGACCAGGTGATCGGCGACGTGGTGCTGTGGGACGCCGGCGCTACGCCCCAGGCCGGTCAGCCGCCGGCCGTGGATGCCCAGCACGTCGCGACCAACGTGCCGACACAGATCCACACCCATGACAACACCCAGGCCGGGGCGGGCGTGACACTCGGGGCCGGGGTGACGATCGGGCCGGGTGTGATCATCGGCGGCAAGGACGCCAAGATCGCGCTGCAGAACCCGGCCAACGCGCCCAAGGACGACGGGACGCAGCGCCTCATCACCGTGCAGGGCGGCACGCCGCCGGCCGGCGGCCAGCAGCTCGCCATGGTGCAGCCGGACGCCAAGGTCGGCCAGCTCGGCCAGGGCGGCGGCCGGGCGCCGATCGCCAATTTCATGCGCTCCAACGCCGGCTGGACGGTGACGCTGTCGACCCCGGAGCCGGCGGTGGCCATCACCTACCGCGTCGGCGAGACGGGCGAGTACCGCGACACCGGCCTGCTCGACGTGCTGGACCAGCGCACCGGCCAGCGCATGCCGAACCCCTCGTTCCAGCTCTCGGGCAAGGCGCAGGCCGCCATCATCCAGGTGCGCTACCAGACCGCCGACGGGGCTGTGGTCGGGCCGTTCCCAATCCGCTTCGACCCCGACGTGGCGCTGTTCGACACCCAGAGGAAGGCGCTGGAGCAGATCTGGCCGAGCTGGGTCGAGTTCCGCGACTTCAACGGCACGCTGGTCTATTTCACCACGCTGATGAGCTATCGCTGCGCCATCACCGAGGTGCGCTACGGCCTCGACGGCGCCGAGCCGCTGCGCCGCTTCGACCTGCCGTCCTGCAACGCCAAGGACCCGTTCTCGATCCCGAGCAACGCCACGACCTATCTGAAGGTGCCGCCGAAGACCAAGTCGATCAGCATCCGCATCACCTGGCGCGACGGCACGCAGTCCGACGTCAACACCATCGAGCGGGAGTGA
PROTEIN sequence
Length: 566
MLRRLLIPALALVLAPFAAQARSVALVIGNDAYANVPRLQKAVNDARSISTELERLGFVVRRVENVDQRSMSKALVAFDADIQAGDRALFFYSGHGFEIGGTNYLLPTDVPAARSNEADLVRDASFPVDRIIDGIREKGAGVAILVLDACRDNPFAAPGTRSTAQSRGLARVDAPEGVFVLMSAGQKQEALDRLSDADDNPNSVFTRTFLGELDKAGRTLVQIAKTTQVKVKDLARSVGYDQTPAYYDQVIGDVVLWDAGATPQAGQPPAVDAQHVATNVPTQIHTHDNTQAGAGVTLGAGVTIGPGVIIGGKDAKIALQNPANAPKDDGTQRLITVQGGTPPAGGQQLAMVQPDAKVGQLGQGGGRAPIANFMRSNAGWTVTLSTPEPAVAITYRVGETGEYRDTGLLDVLDQRTGQRMPNPSFQLSGKAQAAIIQVRYQTADGAVVGPFPIRFDPDVALFDTQRKALEQIWPSWVEFRDFNGTLVYFTTLMSYRCAITEVRYGLDGAEPLRRFDLPSCNAKDPFSIPSNATTYLKVPPKTKSISIRITWRDGTQSDVNTIERE*