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berkeley_reactor_200306_biofilm_scaffold_103592_149

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(145137..145970)

Top 3 Functional Annotations

Value Algorithm Source
Putative Phosphogluconate repressor HexR, RpiR family n=3 Tax=Vibrio nigripulchritudo RepID=U4E9D0_9VIBR similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 275.0
  • Bit_score: 237
  • Evalue 1.30e-59
Uncharacterized protein {ECO:0000313|EMBL:KGE05389.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 277.0
  • Bit_score: 346
  • Evalue 2.10e-92
putative Phosphogluconate repressor HexR, RpiR family similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 275.0
  • Bit_score: 237
  • Evalue 3.70e-60

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Taxonomy

Burkholderia gladioli → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGCTCAAGCAAGTGGCCAAGATCCGCGACAGCCTCAGCAAGGCGGAGCTGCGCCTCGCCGAAGCCATCCTGAAGCAGCCGGAAGCCATCATCACCATGAGCATGGTGGACCTGAAGAAGGCCGCCGACGTCAGCGATCCCACCATCCTGCGCTTCTGCCGGCGGCTCGGCTGCAACGGCTATCCCGAGTTCAAGGTCCGCCTGGCCCAAGGCCTCTCGCCGGAACCGCCCTTCGTCCACCGCGCCATCGAGGCCGGCGACAGCGTTGCTGAGGCCGTCGACAAGATCCTGACCAACTCGATGAACGCCATCAAGCGCTTCGCCAGCGACGTCGATGCCGACGCGGTGGAGCGGGCGGCCGACGCCATGCTGAGCGCGCGCGCCGTCTTCCTGCTCGGCCTCGGCATCTCCGAGACCGTGGCCTTCGATGCCGAGCACAAGCTGTTCCGCCTGGGCCTGCACTGCCGCACCGTGTTCGATTCCCAGCGCCAGATGCTGCTCGCCCCGACGCTGCGCAGCGACGAGGCCGCCGTGTTCTTCTCCCATTCCGGCGCGACGCGGACCCTGGTGAGCGTCGCTGCGCAGGCGCGCGAGAACGGCGTGGCGACGATCGCGATCACCGCGCCGCAGTCGCATCTGGCGCGGACCTGCGACACCGTCATCGCCGTGCCCCGCTACGAGCACAGCGAGCTCTACACGCCGCTCACCGCGCGGCTGAACCACTTCCTCGTCATCAACATGCTGGTCGTCGCGATCGGCCTGAAGCAGGGACGGCGCATGCCGGACAACCTCACGGCGCTCGACCCCTGGCTGACCGAGAAGTTCATGGACTGA
PROTEIN sequence
Length: 278
MLKQVAKIRDSLSKAELRLAEAILKQPEAIITMSMVDLKKAADVSDPTILRFCRRLGCNGYPEFKVRLAQGLSPEPPFVHRAIEAGDSVAEAVDKILTNSMNAIKRFASDVDADAVERAADAMLSARAVFLLGLGISETVAFDAEHKLFRLGLHCRTVFDSQRQMLLAPTLRSDEAAVFFSHSGATRTLVSVAAQARENGVATIAITAPQSHLARTCDTVIAVPRYEHSELYTPLTARLNHFLVINMLVVAIGLKQGRRMPDNLTALDPWLTEKFMD*