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berkeley_reactor_200306_biofilm_scaffold_127933_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5167..6453

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035F9DE1 similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 383.0
  • Bit_score: 426
  • Evalue 1.80e-116
Secretion protein {ECO:0000313|EMBL:ENN89718.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 388.0
  • Bit_score: 407
  • Evalue 2.10e-110
resistance nodulation cell division (RND) drug efflux pump, MFP component similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 381.0
  • Bit_score: 402
  • Evalue 7.90e-110

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
TTGCGCGCCGTCGATCCCGCCGGCGGGGCCGACCTGGCCGCCGAGGCCACGCCACCTGCCGCCCGATCCGACAGGCCCGCCCCTGAATTGCCCGTGGATCGCGGCACGCAGGCGGCGCGGCCCCGGCGGCGCGGCTGGTCCGTCCCGGTCATCGCGCTGGCGCTGGCCGCGGCCGCCGCGGCCGGCTTTCATGTCTGGAACCCCGCCGGGCGAAGCGCCGTGGCACCTGCGGCTCCGGCCGCCGCCATCCCCGTCACCCTGGGCAAGGCCACCGTCAGGGACCTGCCGAACACCCGGTCCGGCGTCGGCAGCGTCACGCCCCTGCGGGTCGTGGACGTCAAGGCGCGCGTCGACGGCCAGGTGCAGCGCCTCGCTTTCGTCGAGGGGAGCGACGTCAAGGCCGGGGATTCCCTGGCCTCGATCGACCCTCGTCCCTATCAGGCCCAGCTTGCCCAGGCGCAGGCGGCCTATCAGAAAGATACGGCACAGCTCGTCAACGCGCGGGCGGACAACAGCCGCGCCAACCGTCTGATCACCAGCGGCGCCGGCACGGTGCAGGCGGCCGACACCACGAAATCGCAGGTGGCCGTGCTGGAGGCGGCGATCGCCGGCGACCAGGCCGTCATCGACATGGCCAGGCTCAATCTCGGCTTTGCCGAGGTCACCGCCCCGATCGCCGGGCGCGTCGGGCTGCGGCAGGTCGACGAGGGCGCCATCGTGCACGCGGGCGATGCGAGCGGCATCGTCACCATCACGCAGATGAGCCCCATCGCCGTCGTGTTCTCGCTGCCCCAGGACGATCTGCCGGATGTGATCGCCGGCCAGGGCCAGGGCGAGCTGCCCGTCGCCGTCGACAGTCGGGACGGAAGCCGGCACCTGGCGGACGGCCGGCTCACCGTGATCGACAGCCAGGTCGACGGGGCGACCGGCATGATCAAGCTGAAGGCGGAGTTCGCCAATGACGGCCGGTCCCTGTGGCCGGGCGAGCTCGTCACCGCCCGCGTGCTCGTCCGGACCGACCGCAACGCCACGGTGGTGCCGTCCGGCGCGGTCCAGAACGGGCAGACCGGTTCCTATGTCTTCACCGTGAAGCCGGACGGCACCGTCGCCGTCGCGCCCGTCAGGACCGGCAGGACGGTCGACGGCGACACGGCGCTGCTCTCCGGCGTCGCGCCCGGTCAGGAGGTCGTGCTCGACGGGCAGTCTCGCTTGACCGAGGGGGCGAGGGTGGTCGCCGTGACGGCAGATGCCGCTCCGCCGTCCGGGAACGCCGGGGCACCCAAATGA
PROTEIN sequence
Length: 429
LRAVDPAGGADLAAEATPPAARSDRPAPELPVDRGTQAARPRRRGWSVPVIALALAAAAAAGFHVWNPAGRSAVAPAAPAAAIPVTLGKATVRDLPNTRSGVGSVTPLRVVDVKARVDGQVQRLAFVEGSDVKAGDSLASIDPRPYQAQLAQAQAAYQKDTAQLVNARADNSRANRLITSGAGTVQAADTTKSQVAVLEAAIAGDQAVIDMARLNLGFAEVTAPIAGRVGLRQVDEGAIVHAGDASGIVTITQMSPIAVVFSLPQDDLPDVIAGQGQGELPVAVDSRDGSRHLADGRLTVIDSQVDGATGMIKLKAEFANDGRSLWPGELVTARVLVRTDRNATVVPSGAVQNGQTGSYVFTVKPDGTVAVAPVRTGRTVDGDTALLSGVAPGQEVVLDGQSRLTEGARVVAVTADAAPPSGNAGAPK*