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berkeley_reactor_200306_biofilm_scaffold_127933_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(24006..24824)

Top 3 Functional Annotations

Value Algorithm Source
polyamine ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI0003712CE0 similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 269.0
  • Bit_score: 462
  • Evalue 2.50e-127
polyamine ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 261.0
  • Bit_score: 446
  • Evalue 3.90e-123
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJC72229.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 260.0
  • Bit_score: 444
  • Evalue 5.70e-122

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGGGCAGGACATCGCTCGCGCTGAATCCGCTCTCCGTGCTGCTCTGGCTGGCGGGCGGCCTCGTCCTCGCCTTCCTGGTGGCGCCGATCGTCGCCATCGTGCCGCTCTCCTTCAACGCCGAGCCGTTCTTCACCTATCCCATGCCGGGCCTGTCACTGCGCTGGTACCAGGAGTTCTTCGGCTCCGAGGTCTGGCAGCTCGCCCTGCGCAACAGCATCGTCGTGGCGACCTCGGCCACCGTGCTGGCGACGTTCCTCGGCACGCTGGCCGCCATCGGCCTGACGCGGCCCGACTGCCCGGCGCGCGCCACGCTGACCGCGATCCTGATCTCGCCGATGATCGTGCCGGTGATCGTCTCGGCGGTCGGCATCTATTATGCCTTCGCCGCGGTCGGCCTGCTCAACACGCTGACCGGCCTGGTGCTCGCCCATACCGCCATCGGCGCGCCCTTCGTCGTGATCACGGTGACGGCGACGCTGGCTGGCTTCGACCAGACCCTGATGCGCGCCGCGGCGAGCCTCGGGGCACCGCCGCCGGTGGCGGTGCTGCGCGTCATGCTGCCGATCATCGCGCCCGGTGTCGTCTCCGGCGCGCTGTTCGCCTTCGTCACCTCCTTCGACGAGGTGGTGATCGCCCTGTTCATTTCCGGCTCCGAGCAACGCACCCTGCCGCGCCAGATGTGGAGCGGCGTGCGCGAGACGCTGAGCCCGACCATCGCCGCCGTGGCGACGCTGCTGATCCTGTTCTCCACGATCTTCCTGATGACCGTGCAATGGCTGCAGCGCCGGGCCGAGCGCCAGAAGCTTTCACCCACCTGA
PROTEIN sequence
Length: 273
MGRTSLALNPLSVLLWLAGGLVLAFLVAPIVAIVPLSFNAEPFFTYPMPGLSLRWYQEFFGSEVWQLALRNSIVVATSATVLATFLGTLAAIGLTRPDCPARATLTAILISPMIVPVIVSAVGIYYAFAAVGLLNTLTGLVLAHTAIGAPFVVITVTATLAGFDQTLMRAAASLGAPPPVAVLRVMLPIIAPGVVSGALFAFVTSFDEVVIALFISGSEQRTLPRQMWSGVRETLSPTIAAVATLLILFSTIFLMTVQWLQRRAERQKLSPT*