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berkeley_reactor_200306_biofilm_scaffold_127933_47

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(52407..53399)

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent dehydratase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CABDB similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 328.0
  • Bit_score: 439
  • Evalue 1.60e-120
WcaG protein {ECO:0000313|EMBL:BAQ47947.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 327.0
  • Bit_score: 431
  • Evalue 7.90e-118
hpnA; hopanoid-associated sugar epimerase HpnA similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 328.0
  • Bit_score: 426
  • Evalue 5.10e-117

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Taxonomy

Methylobacterium aquaticum → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGTCGGTGGTGGTCGTGACGGGGGCCGGCGGTTTCGTCGGTTCCGCGGTGGCTCGTCTCCTGTCCGGGGCGGGGCATCGCGTGCGCGCCATCGTCCGGGCCTCCTCGCCCCGCCGCAACCTCGAGGGCACCGGCTTCGAGGAGGTCGCCGGCGACCTGCGCGACCCCGATGTCGCCGGGCGGGCGATGCAGGGAGCCCGGGCCCTGTTCCACGTCGCCGCCGACTATCGCCTCTGGGCGCCCGACCCCGACGAGATCCGGCGCAACAACCTCGCCATGACCGGGGCCGTCATGCGCGCCGCCCTCGCCGCCGGCGTGGAGCGCGTGGTCTATACCTCCAGCGTCGCCACCCTGGCGCCGCCCCACGGCACGGAGCCGAGCGACGAGACCCGTCCGCTCGACGAGCCCGGCGCGGTCGGCGTCTACAAGCGCAGCAAGGTGGCGGCCGAACGCCTGGTCGAGGCCATGGTCCGCGACGAGGGCCTGCCGGCCGTCATCGTCAATCCCTCGACGCCGATCGGCCCGCGCGACGTGCGGCCGACCCCGACGGGACGCGTGGTGGTCGAGGCGGCCTCGGGCCGAATGCCGGCCTTCGTCGACACCGGCCTCAACCTCGTGCATGTCGACGACGTCGCCCGCGGCCATCTCCTCGCCCTCGACCATGGCCGCATCGGCGAGCGCTACGTCCTCGGCGGGCAGGACGTGGCGCTGGCGCGCATGCTCGCCGACATCGCGGCCCTGGTCGGGCGCCGCCCGCCGCGCATCCGCCTGGCGCGCGGGCTGGTGGTGCCGCTCGCCGCCGCGGCGGAAGCCGTGGCGCGCCTCACCGGCCGCGAGCCCTTCGTCAGCCTGGACGCGCTCCGGATGTCGCGCCACAAGATGTACTATTCCTCGGCCAAGGCCACCCGGGAGCTCGGCTACCACGCCCGCCCCTACGGCGAGGCGCTGGCCGACGCCGTCGCCTGGTTCCGGTCGGCGGGCTATATCCGGTGA
PROTEIN sequence
Length: 331
MSVVVVTGAGGFVGSAVARLLSGAGHRVRAIVRASSPRRNLEGTGFEEVAGDLRDPDVAGRAMQGARALFHVAADYRLWAPDPDEIRRNNLAMTGAVMRAALAAGVERVVYTSSVATLAPPHGTEPSDETRPLDEPGAVGVYKRSKVAAERLVEAMVRDEGLPAVIVNPSTPIGPRDVRPTPTGRVVVEAASGRMPAFVDTGLNLVHVDDVARGHLLALDHGRIGERYVLGGQDVALARMLADIAALVGRRPPRIRLARGLVVPLAAAAEAVARLTGREPFVSLDALRMSRHKMYYSSAKATRELGYHARPYGEALADAVAWFRSAGYIR*