ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_126567_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 10387..10677

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=RL28_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 91.0
  • Bit_score: 129
  • Evalue 1.70e-27
rpmB; 50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 91.0
  • Bit_score: 129
  • Evalue 4.90e-28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 91.0
  • Bit_score: 129
  • Evalue 2.40e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGTCTCGCCGCTGCGCGCTGACCGAGAAGGCCGTCCAGACCGGCCACAAGGTCAGCCACTCCAATGTCAAGACCAAGCGCAAGTTCCTGCCGAACCTGCACAACGTCACGCTCATCTCCGACGTGCTCTCCCGTTCGGTGCGACTGCGCGTCTCGGCCGCCGGCCTGCGCTCGGTCGAGCACAGCGGCGGGCTCGACGCCTGGCTGATCAAGACCAGCGTCTCCGAACTCTCCGCGCCGGCCGCCAAGCTGAAGCGCGAGATCGAGAAGAAGATGACGACGGCGCACTGA
PROTEIN sequence
Length: 97
MSRRCALTEKAVQTGHKVSHSNVKTKRKFLPNLHNVTLISDVLSRSVRLRVSAAGLRSVEHSGGLDAWLIKTSVSELSAPAAKLKREIEKKMTTAH*