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berkeley_reactor_200306_biofilm_scaffold_126567_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 22665..24158

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EN17_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 467.0
  • Bit_score: 486
  • Evalue 2.20e-134
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 467.0
  • Bit_score: 486
  • Evalue 6.30e-135
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ACK49152.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 467.0
  • Bit_score: 486
  • Evalue 3.10e-134

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Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGAGGGTTCGAGACACGGCATGGACGGCGGACGGGGGCCGGCCGATCCGGCTCGGGGCCCGCTCCGCGCGGCTCTGCCTGGCCGGGGCGACGCTGGCCCTCGGCGGCTGCATGGTCGGCCCCGACTACCTGCGCCCGGCCGCGATCGTTCCCGCGCAATACAAGGAGATGAAGGGCTGGAAGCTCGGCGAGCCGCGCGACGACTTCGCCAAGGGTCAGTGGTGGACGGTGTTCCACGACCCCGAGCTCGACGCCCTGATGCCGCAGGTGGCGGCCTCGAACCAGACCCTGAAGGCGGACGAGGCCAATTACCGCGAGGCGCAGGCGCTGATCGCACAGGGCCGGGCCCAGCTCTTCCCGACGCTGAGCCTCAACCCGGAGCTGTCGCGCTCCTCCAGCCAGGGCCCGCTGCTCACCGCCGAAGCCAATGCGAGCTGGACCCTCGACCTCTGGGGCGGGGTCCGGCGGACGATCGAGGGCGAGACCGCCGGCGCCCAGGCCAGCGCCGCAACCCTCGCCAACGCGACGCTGTCGATGCAGTCCTCGCTCGCCACCGCCTATTTCGAGCTCAGGGAGACGGATGCCCTGCACGACCTCCTGGCCGACACGGTGGCGCAGTACAAGCGCTCGCTCGACATCACCCAGAACCAATATTCGGCGGGAACCTCGGCCCGCTCCGACGTCATCACCGCCAAGGCGCAGCTCCTCGCCGCCCAGGCCCAGGCGATCAACACCGGCGTCGCCCGCGCCCAGTACGAGCACGCCATCGCCGTCCTGATCGGCCGGGCGCCGGCGCAGCTCACGATCCCCCACGGCGGCCTGTCGAGGACGGTACCCTCGATCCCGTTGCAATTGCCCTCCGCCCTGCTGGAGCGGCGCCCCGACATCGCCGGGGCGGAACGCACCATGCAGCAGCAGAACGCCCAGATCGGCGTGGCGATGGCGGCCTATTATCCCAGCGTCTCGCTCTCGGGCGCGTTCGGCTATTCCGGCGATCCCTTCCGCAGCTCGCTCGGCGTCACGAATCCCGCCTGGTCCTACGGCCTGTCGATCGCCCAGACTTTGTTCAACGGCGGCCTGACCGCCGCCCAGGTCGCGGCAGCCAAGGCCAATTACGATGCGAGCGTGGCCACCTATCGCCAGACCGTCCTCACCGCCTTCCAGCAGGTGGAGGACGAGCTCGCCGCCATCCGCGTCCTCTCCCAGGAAGCCGGCGTGCAGTCGCAGGCCGTCGCCGCCGCCGAGCAGGCCGTGCAGATCGCCCTCAACGAGTATCGCGCCGGCACGCAGGCCTTCACCACGGTGGTGACCGCGCAGGCGACGGCGCTGTCGGACGAGGAATCGCTGCTCACGACCCGGGAGCAGCGCCTCGCCGCCGCGGTGAGCCTGATCGTGGCGCTGGGCGGGGGCTGGGACACGACGCAGCTTCCGTCCCCGGCGGCCGCGGCGGCCGGGCCCGGTCAGGCGCCTCCCGTGCGGGCGAATGCGGGATAG
PROTEIN sequence
Length: 498
MRVRDTAWTADGGRPIRLGARSARLCLAGATLALGGCMVGPDYLRPAAIVPAQYKEMKGWKLGEPRDDFAKGQWWTVFHDPELDALMPQVAASNQTLKADEANYREAQALIAQGRAQLFPTLSLNPELSRSSSQGPLLTAEANASWTLDLWGGVRRTIEGETAGAQASAATLANATLSMQSSLATAYFELRETDALHDLLADTVAQYKRSLDITQNQYSAGTSARSDVITAKAQLLAAQAQAINTGVARAQYEHAIAVLIGRAPAQLTIPHGGLSRTVPSIPLQLPSALLERRPDIAGAERTMQQQNAQIGVAMAAYYPSVSLSGAFGYSGDPFRSSLGVTNPAWSYGLSIAQTLFNGGLTAAQVAAAKANYDASVATYRQTVLTAFQQVEDELAAIRVLSQEAGVQSQAVAAAEQAVQIALNEYRAGTQAFTTVVTAQATALSDEESLLTTREQRLAAAVSLIVALGGGWDTTQLPSPAAAAAGPGQAPPVRANAG*