ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_131415_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 33458..35572

Top 3 Functional Annotations

Value Algorithm Source
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:KCV60937.1}; EC=2.4.-.- {ECO:0000313|EMBL:KCV60937.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 685.0
  • Bit_score: 475
  • Evalue 7.80e-131
Capsular polysaccharide biosynthesis protein n=2 Tax=Bordetella bronchiseptica RepID=K0MW06_BORBM similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 685.0
  • Bit_score: 470
  • Evalue 2.30e-129
wbpT; capsular polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 685.0
  • Bit_score: 470
  • Evalue 6.60e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2115
ATGGCTGCAGGGCGTTTCCTGTCCATTTTCACAGGCCGCGGTGCGGGATCGCCCGGCGGGCGCGCCCTTGACTTTGAAACGATCCTCGAAACTCTGGAGCAGGCGCTTCCTGCCAAGGGAAACGGCTCGGGGCATCATGCGCCGGGCCGTCGTGACCTGACGGAGGCGACGGCTCTGATCCAGGTGCCGTCGGGCGATCCCAGCATCGACGGGCGGCTGCAGCGATTGTTGCAGATCGTCGGCGCCTTTCCGGACGACGAGCGCCTGTATCTCCTGTTCGGCCGTCTCGTCGAGCGCTCCCGCCACAAGAAGAGAAGCCACGAGATCTGGCGCGTGATTCACCGGCGCTTCCCGTCGTCGGAGTTCGCGTTCGCGCGGCTCATTCGATGGACGAGTCGCGATCTCGGCGTCGAGGCCGCGCATGCCGCCATCTCCGCGCAATTTCCGGCATTGCCCGACAGCCCGAGGGATCTTCGACTGTATGCGGCCGGCTTCATCGAGCTCAACGAGTACGATCTCGCCGACAGCGCCTGCGACTCGCTGCTGCAGAAGCGCCCCGACGATGAGGCGAGCTATGTACAATATGCGCAATCGCTGGTGAAGCGAAGCGAATTCGAGCGGGCCGTCGAGGTTCTCCAGGCCGGAAAGCAGACCATCAGAGCTTCGACGCCGGCCATAAACAAAGACCTGCAGAAGATTCAAAAGAAAATCGATGACATATCCTTGCGCCTTCCGGAAATCATCGTCACCGGCCGGCGCACGACCGACGTCGCCCTCAACAATCTGGTCGACGAGATCCTGACCGCGGGGCGCCCGGTCCGGCCGCCGTCGACATTCGTGGGCTCGGTTCTGCTCATGACCGGGTCCCTGGGGGCGGGCGGTGCCGAGCGCCAGCTCGTGGAGACCGCGACGGCCCTGCAGAACGCCCTGGTGTCCGGCGAGCCGGTCGGAGACAGCGCGGTCTTCGGGCCTCTGTCGGTGTTCTGCCGCTCGCTCAGCTCGCGCCCCGGCGCGAGCTTTTTCCTCAAGCCGCTGGTCGATCGCGGCATTTCCGTCTCGGAGTTTTCGAATTTCCTGCCCTATGGCGGGCAGGAGAGGCGCTCGCTGCTTCTGCCCTATGCCAGATACCTGGAATTTCTTTCGCCCCAGATCTCCGTCGGCACGATCAAGCTGGTGGATGCGATCAATTTCCTGTCTCCGCAGATCGCGCATATCTGGCAGGACGGCATGGTCCTGGAAGCCACGATCGCCGCCTTGATCGCCGGCGTGCCGCGCATCATCCTGTCCACCCGCACCATGCCGCCGCCTGATCGCCTCGGCCGCAACAAGCCCGAATATGTCGATCTCTACAGAGCCGTCCTGCGTGCGCCCGGCGTGGTCCTGACGGCGAACTCGAGGCGCGCGGCGAACCGATATGCCGAATGGCTGAGCGTGGATCCTGCGTCCATCCACGTGATCAGCAACGGCGTCACGCTGCCCTCGCCCGATCCTGCGCCGTCCTCGACCGAGATGTGGGAGCGATTCGCGGCGCAAACGGCCGGGGCCCGGTTCACGGTCGGAACGGTGATCCGCTTCGACGAGAACAAGCGGCCGCTGGTGTGGCTCGACGCCGCGGCCCGTGTCGAAGGCGCCCGTTTCGTCCTCGTCGGAGACGGCCCGCTGCGCGACCGGACCATCGAGCGCGCCCGCGAGCTGGGCATCGCCGACCGGGTCCTCTTCCCCGGCCGGGTTTCCGACGTCGGCTTCTGGCTTTCGAAATTCGACGCCTTCATGCTCCTCTCCCACGTGGAGGGGCTGCCCAATGTCCTGATCGAGGCGCAGCTCGCCGGTGTCCCGGTCATCACCACCCCGGCGGGCGGGTCGGTGGAGACCATGCTCCCGAACGAAACCGGCTTCGTCCTGCCAAGCGAGCGCGTGGTCGATCCGGCGGATGCCGCAGCGCTCCTGCAGCGCCTGTTCGCCGACGCGGACCGGTGGCGGATGATGTCGCAGCGGGCGCGGGAGTGGGGCTCGGCCACCTTCTCGGTGCGTCGCATGGCGGAGGCGACCGTCGAGCAATATCTCGGGATTCACGACGGGGCGAGCGCCGAGAAGCGCTTCATGGTTTCGGGGTAA
PROTEIN sequence
Length: 705
MAAGRFLSIFTGRGAGSPGGRALDFETILETLEQALPAKGNGSGHHAPGRRDLTEATALIQVPSGDPSIDGRLQRLLQIVGAFPDDERLYLLFGRLVERSRHKKRSHEIWRVIHRRFPSSEFAFARLIRWTSRDLGVEAAHAAISAQFPALPDSPRDLRLYAAGFIELNEYDLADSACDSLLQKRPDDEASYVQYAQSLVKRSEFERAVEVLQAGKQTIRASTPAINKDLQKIQKKIDDISLRLPEIIVTGRRTTDVALNNLVDEILTAGRPVRPPSTFVGSVLLMTGSLGAGGAERQLVETATALQNALVSGEPVGDSAVFGPLSVFCRSLSSRPGASFFLKPLVDRGISVSEFSNFLPYGGQERRSLLLPYARYLEFLSPQISVGTIKLVDAINFLSPQIAHIWQDGMVLEATIAALIAGVPRIILSTRTMPPPDRLGRNKPEYVDLYRAVLRAPGVVLTANSRRAANRYAEWLSVDPASIHVISNGVTLPSPDPAPSSTEMWERFAAQTAGARFTVGTVIRFDENKRPLVWLDAAARVEGARFVLVGDGPLRDRTIERARELGIADRVLFPGRVSDVGFWLSKFDAFMLLSHVEGLPNVLIEAQLAGVPVITTPAGGSVETMLPNETGFVLPSERVVDPADAAALLQRLFADADRWRMMSQRAREWGSATFSVRRMAEATVEQYLGIHDGASAEKRFMVSG*