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berkeley_reactor_200306_biofilm_scaffold_125732_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 8209..9381

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE6D5F related cluster n=1 Tax=unknown RepID=UPI0003CE6D5F similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 386.0
  • Bit_score: 449
  • Evalue 3.10e-123
ROK family transcriptional regulator {ECO:0000313|EMBL:ESY15839.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 386.0
  • Bit_score: 449
  • Evalue 4.30e-123
ROK family protein similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 378.0
  • Bit_score: 422
  • Evalue 6.70e-116

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Taxonomy

Mesorhizobium sp. LNJC395A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
GTGACCACTCCCCAGGCGATCCGTCAGCTCAACGAGACCCGTGCTCTCGCCGCCCTGTTCCGGGCCGGCGGCATGAGCCGCGCCGAGCTCGCCCGCAGCCTCGGCCTCACCCGCTCGACCACCGGCAGCCTGGTGCAGAGCCTGCTCGATGCCGGCCTGGTGCGCGAGCGGCCGGAGGAGGAGGCGGCGGCCCGGGTCGGGCGGCCCGGCATCCTGGTCGAGATCGACGGCGACGGCGCCTTCTTCATCGGCGCCGATATCGGCGTCGACCGCATCACCGCGCTGGCGGTCGACCTTGCCGGCATGGTCCGTCATGCCGTGGAGCGCGATTTCCGCGGCGCCGGCTGCGATCCCGCCGCGGCGATCGAGCTGACGGCGCGGCTGATCGGCGAGGCGCTGGCGGCGCTGCCCGCGGGGGGGCGCGTCGAGGGCATCAGCGTCGCCATTCCCGGCTTCCTCGCCGCCGACCAGCGCACCTACCACGCCACCATCCTGGGCTGGCACGGGGTCGAGGTGGCCAGCCTGCTGCGCCGGCAGCTCGGCATCGACCGGCCCGTGCTGCTGGAGAACGATGCCAACGCTTTCGCCGTGGCGGAGACCTACCGGCAGGCCGGGCGCGAGCCCGCCGATATCCTGGTGGTGCTGATCGAGAACGGCGTCGGCGGCGGCATCATCGCCGGCGGCCGGCTCTATCACGGGCGCCAGCGCGGGGCGGGCGAGATCGGCCATATCCGCATCGGCGAGGAGGGCTATGTCTTCGATCCGCGCCGCCCCGGCCGTTTCGAGACCTTTGTCGGCAAGGACGCGCTGCTCGCCCGCTGGCGCTATCACGGCGGCACGCCGGCGACGCTGGCGGGCCTGCTCGCAGCGCTCGAGGCTGGCGATGCCGCCGCACAGCGGACCGCTGCGGACTGGGGCCGCTGGCTCGCCCGCGGCCTCGCCGCCCTGATCTCGACGCTCGAGCCGCAGAAGGTCGTGCTCGGCGGCTCGGTGAGCGCGGTGTTCCCCTTCGTGGCCGAGGCGGTCGCCCGGGAGGTCGAGGCCTCGCTGGTGGAGGGCTACCCCGTGCCGGCCATCGAGACGTCGACGGTGCGGACCGCCGGCCCGGCCCTCGGGGCGGCCTATCTGCTGCACCAGGCGATGCTGTCGATGGACGCGCAATTCCAGGTCTGA
PROTEIN sequence
Length: 391
VTTPQAIRQLNETRALAALFRAGGMSRAELARSLGLTRSTTGSLVQSLLDAGLVRERPEEEAAARVGRPGILVEIDGDGAFFIGADIGVDRITALAVDLAGMVRHAVERDFRGAGCDPAAAIELTARLIGEALAALPAGGRVEGISVAIPGFLAADQRTYHATILGWHGVEVASLLRRQLGIDRPVLLENDANAFAVAETYRQAGREPADILVVLIENGVGGGIIAGGRLYHGRQRGAGEIGHIRIGEEGYVFDPRRPGRFETFVGKDALLARWRYHGGTPATLAGLLAALEAGDAAAQRTAADWGRWLARGLAALISTLEPQKVVLGGSVSAVFPFVAEAVAREVEASLVEGYPVPAIETSTVRTAGPALGAAYLLHQAMLSMDAQFQV*