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berkeley_reactor_200306_biofilm_scaffold_140837_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 15775..17052

Top 3 Functional Annotations

Value Algorithm Source
Sugar ABC transporter periplasmic protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ES06_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 403.0
  • Bit_score: 508
  • Evalue 4.70e-141
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM34130.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 425.0
  • Bit_score: 585
  • Evalue 4.20e-164
thuE; ABC transporter sugar-binding protein similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 418.0
  • Bit_score: 516
  • Evalue 3.70e-144

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGAGACGGGGATTGAGCGGTTTGGCCGGCGCGGCGGCGCTGCTTCTGGCGAATGCGGCCCTTCCGGCCCGCGCCGACACGGTTTCCCTTTTCTGCAGCTCCTCCGGCTCCGAATACGAGATCTGCAAGGCCGGCGCCGACGCCTGGGCCAGGCAGACCGGCAACGAGGTCAGGATCAACAAGATGCCGGCGGCCTGGGATGAGGCGCTGCCGCTCTACCAGCAGCTGCTCTCGGCCCAGTCGACCGATGCCGACGTGCTGCTGCTCGACGTCGTCTGGGTCGGTCTCCTGCAGAAGAACCTGCTCGATCTCAATGCGGACCTGTCCAAGGACGACATCGCCCAGCACTTCCCGGCGACCGTCGCCGCCGGCACCGTCAACGGCCGGCTGGTGGCGCTGCCCTGGTACACGGATACCGGGCTGATGTTCTACCGCAAGGACCTGCTCGCCAAGTACGGCAAGCCGGTGCCGAAGACCTGGGCCGAGCTGACCGAAACGGCCAAGGCCGTGCAGGACGGCGAGCGCGCCGCCGGCAACAAGGACATCTGGGGCTATGTCTGGCAGGGCAAGTCCTACGAGGGCCTGACCTGCGACGCGATCGAATGGACCGCCTCCTCCGGCGGCGGCACCATCATCGACGACAAGGGCGCCATCACCATCGACAATGCCAAGGCGGCCGGCGCGCTCGCGCTGGCGCATGGCTGGGTCGGCTCGATCACCCCGCCGGGCGCCCTCAACTATGACGAGGAGGGCTCGCGCAGCGTTTTCGAGACCGGAAACGCCGTGTTCCTGCGCAACTGGGCCTATGTCTGGGGCACCTCGCAGGCCGCGGGCGCGCCGCTGGTCGGCAAGGTCGGGGTCGCGGCCCTGCCGGTCGGCGCCGCCGGCGAGAGGTCGAGCGGCTGCATGGGCACCGCCCATCTCGGCATCTCGAAATACACCCGGCACAAGGACGCCGCCCTCAGCCTGCTGCACTTCCTCGCCGGCAAAGACGAGCAGAAGCGCCGCGCCATCGCCGGCGCCTACAACCCGACGATCGCGGCGCTCTACGACGATGCCGACGTGCTGAAGGCCCTGCCCTTCCTCAAGGACGCCGAGGCCGCCTTCGCCGAGAGCGCCGTGCGCCCCTCGGCCATCACCGGGTCGAGCTACAACCGGGTGTCGCAGGCCTTCTTCAAGGCGGTGCACGGCGTGCTCGGCGGCGACACCGAGGCCGGCCCGGCGCTGAAGACCCTGGCGGAGGACCTCGCCACCATCAAGGCCGCCGGCAAGTGGTGA
PROTEIN sequence
Length: 426
MRRGLSGLAGAAALLLANAALPARADTVSLFCSSSGSEYEICKAGADAWARQTGNEVRINKMPAAWDEALPLYQQLLSAQSTDADVLLLDVVWVGLLQKNLLDLNADLSKDDIAQHFPATVAAGTVNGRLVALPWYTDTGLMFYRKDLLAKYGKPVPKTWAELTETAKAVQDGERAAGNKDIWGYVWQGKSYEGLTCDAIEWTASSGGGTIIDDKGAITIDNAKAAGALALAHGWVGSITPPGALNYDEEGSRSVFETGNAVFLRNWAYVWGTSQAAGAPLVGKVGVAALPVGAAGERSSGCMGTAHLGISKYTRHKDAALSLLHFLAGKDEQKRRAIAGAYNPTIAALYDDADVLKALPFLKDAEAAFAESAVRPSAITGSSYNRVSQAFFKAVHGVLGGDTEAGPALKTLAEDLATIKAAGKW*