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berkeley_reactor_200306_biofilm_scaffold_140837_33

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(35430..36422)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=2 Tax=Xanthobacteraceae RepID=UPI000374794B similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 311.0
  • Bit_score: 384
  • Evalue 7.90e-104
Putative High-affinity branched-chain amino acid transport system permease protein livM (LIV-I protein M) {ECO:0000313|EMBL:CDX56473.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 316.0
  • Bit_score: 463
  • Evalue 1.40e-127
livM; branched-chain amino acid ABC transporter system, permease protein similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 327.0
  • Bit_score: 308
  • Evalue 2.00e-81

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGCGCGACACCGTCATCGCCAGGCGAACCGCCGGCCTGCCGCGCCTCGTCGGCGTGCTCCTGCTCCTCGCGGCCGCCGCGGCGCTCGCGGCCGTGCCCTTCCTGCCCAACTACTACGTGCGCGTCGCCGACAGCCTGCTGATCTACGTGCTGCTCGGCATGGGGCTCAACATCGTCATCGGCTATGCCGGCCTGCTCGACCTCGGCTACGTCGCCTTCTATGCCGTCGGCGCCTATACCTATGCCCTGCTCGCCAGCCCGCAATTCGGGCTGCACCTGCCCTTCCTCCTGATCCTGCCGATCGGCGCCCTGCTCGGGGGCCTCGCCGGCATCCTGCTCGGCATCCCGGTGCTGCGCCTGCGGGGCGACTATCTCGCCATCGTCACCCTCGGCTTCGGCGAGATCATCCGCGTGGTCATCAACAATGCCGACGGCCTGACCAACGGGCCGCGCGGCATCACCCGCATCGACCGGGCCGAGGTCTTCGGCCTCACCATCGCCACGCCGGTCGCCGTCTATGGGCTGCTGCTGGTGACCTGCGTCATCGTCGGCGTGCTGGTCTGGCGGCTGGAGAAGTCGATCATGGGCAAGGCCTGGGCGGCGATCCGCGAGGACCAGGACGCGGCGCGCGGCGTCGGCATCGACACCACCAGGGCCAAGCTCGCCGCCTTCGCCATCAGCGCCATGATCGGCTCGGTCACCGGCGTGATCTTCTCCGCCTTCCAGCGCTTCGTCAGCCCGGAGAGCTTCACCTTCCAGGAATCGGTGCTGATCGTCCTGATGATCGTCATCGGCGGCATCGGCAACATCCTCGGCATCATCGCCGGCGCGGCGGTGCTGCTGCTGCTGCCCGAGGTGCTGCGCGAATTCGCGGAATGGCGCATCCTCTTCCTCGGCGGCCTGATGATCGTGCTGATCATCGCCCGGCCGCAGGGGCTGGTGCCCCGGAGCTTCGGTCCGGAGAAGCTCATCGGAGCCCTGCTGCGCCGATGA
PROTEIN sequence
Length: 331
MRDTVIARRTAGLPRLVGVLLLLAAAAALAAVPFLPNYYVRVADSLLIYVLLGMGLNIVIGYAGLLDLGYVAFYAVGAYTYALLASPQFGLHLPFLLILPIGALLGGLAGILLGIPVLRLRGDYLAIVTLGFGEIIRVVINNADGLTNGPRGITRIDRAEVFGLTIATPVAVYGLLLVTCVIVGVLVWRLEKSIMGKAWAAIREDQDAARGVGIDTTRAKLAAFAISAMIGSVTGVIFSAFQRFVSPESFTFQESVLIVLMIVIGGIGNILGIIAGAAVLLLLPEVLREFAEWRILFLGGLMIVLIIARPQGLVPRSFGPEKLIGALLRR*