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berkeley_reactor_200306_biofilm_scaffold_140837_45

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 46055..47029

Top 3 Functional Annotations

Value Algorithm Source
Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:CDX32507.1}; EC=1.2.4.1 {ECO:0000313|EMBL:CDX32507.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 323.0
  • Bit_score: 485
  • Evalue 5.90e-134
Transketolase central region id=2429425 bin=GWF1_Rhodobacteraceae_65_7 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 325.0
  • Bit_score: 470
  • Evalue 1.10e-129
transketolase similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 324.0
  • Bit_score: 347
  • Evalue 3.90e-93

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGGCCCTGATGCGCTATGCCGAAGCCCTGCGCGCCGCGCTGCGCGAGGAGATGCAGCGCGACCCCGATGTCTGGCTGTTCGGCGAGGACATCGCCGTCTATGGCGGCGTGTTCAAGGTGACGCGCGACCTCGTGCAGGAGTTCGGCCCGGAACGGGTGCGCGACACGCCGATCTCCGAGCAGACGCTCACCGCCATGGCCGCCAGCGCGGCGATGACCGGCACGCGGCCGGTGCTGGAGATCATGTATGCCGATTTCCTGCCGCTCAGCATCGACGCGCTGATCAACCAGGCCTCGATCTACAATTATATCTGGGACGGCCAGGTGACGATGCCCTTCGTGCTGCGCACCCAGGGCGGCGGCGGGGCCGGCGCCGGCGCGCAGCATTCCAAGAGCCTCGACGCGCTCGTCGCCCATATCCCCGGCCTCAAGGTGGTGGCCCCGGCGACCGCGGCCGATGCCAAGGGCCTGCTCAAGGCCGCCATCCGCGATGATCATCCCGTGGTGTTCCTGGAGCACAAGCTGCTCTACAACATCCGCGACGAGGTGCCCGACGGCGAGCATATGGTCGAGATCGGCCGGGCCCGTATCGCCCGCCCGGGCCGGCACGTCTCGATCGTCGCCTCCTCGCGCATGGTCCATGAATCCCTCAAGGCGGCGGATGTGCTCGCCGGCGAGGGCATCGAAGCCGAGGTGATCGACCTCCGGACGCTGCGCCCGCTCGACCGCGACACCATCGTCGCCTCGATCCGCAGGACGCATCACGCCGTGGTGGTCAACGAGGGCTGGCGCTTCTGCGGTTATGGCGCCGAGCTCAGCGCCACCATCATGGAGGCGGCGTTCGACGACCTCGATGCCCCGGTCGAGCGCGTTGGCACGCTCGACATCCCGATCCCCTACAGCGAGCCGCTGGAGAACGCCGTGCTGCCCTCCGCCGCTGTCATCGCGGCGGCGGCGCGGCGCGCCGTGGCCTGA
PROTEIN sequence
Length: 325
MALMRYAEALRAALREEMQRDPDVWLFGEDIAVYGGVFKVTRDLVQEFGPERVRDTPISEQTLTAMAASAAMTGTRPVLEIMYADFLPLSIDALINQASIYNYIWDGQVTMPFVLRTQGGGGAGAGAQHSKSLDALVAHIPGLKVVAPATAADAKGLLKAAIRDDHPVVFLEHKLLYNIRDEVPDGEHMVEIGRARIARPGRHVSIVASSRMVHESLKAADVLAGEGIEAEVIDLRTLRPLDRDTIVASIRRTHHAVVVNEGWRFCGYGAELSATIMEAAFDDLDAPVERVGTLDIPIPYSEPLENAVLPSAAVIAAAARRAVA*