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berkeley_reactor_200306_biofilm_scaffold_150155_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3985..4902

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter inner membrane component n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7Z9R4_ROSLO similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 306.0
  • Bit_score: 441
  • Evalue 3.80e-121
ABC transporter permease {ECO:0000313|EMBL:KJC50531.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 286.0
  • Bit_score: 490
  • Evalue 1.30e-135
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 306.0
  • Bit_score: 441
  • Evalue 1.10e-121

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGACCAGCGCCGTCACGACCGCGCCGCGGACGCGTGCCTTCGCCCTGCCGCGCTTCCTCACCTCCGAGCATCCCTTTCCCTGGCTGGCGCCGATCACCGCCATGCTCCTGGTGTTCGGCGTCTATCCCCTGCTCTACGCCCTCTGGCTGTCGCTGCAGAAGCGCAACCCGGTGACGCGGATCAGCGTCTTCAACCCGACCTGGAACTGGAGCAAGATCTTCGCCGACGAGCGGGTCTGGGGGGCGGTCGGCCGCACCTTCGCCTATACCGGCACCGCCATCGTCATCGAGCTCGTGCTCGGCCTCCTCATCGCGCTGCTGCTCGATTCCGACCGCCGGGGCTACGCCATCCTGCGCGCGCTGATGACCCTGCCGCTGGTGGTGCCGCCGGCGGTGACCGGCATGATGTTCCTGCTCATGCTCGACGGCACCTTCGGCGTCATCAGCCGCGGCCTCTATGCCAGCGGCCTGTGGTCGGCGGATCATCCGATCCTGGCGACCGGTAGCGTCGCGCTGCTCGGCATCCTGCTGGCGGACGTCTGGCAATGGACGCCGTTCATGGTGCTGATCATGCTGGCCGGGCTGCGCGCCCTGCCCAGGGAGCCCTACGAGGCGGCGGCGATCGACGGCGCCAGCGCGGTGCAGGCCTTCTTCAGGCTGACGCTGCCGATGCTCTCCAAGATCATCGCCATCGCCGTCTTGATCCGCGGCGTCGACCTCTTCCGCATCTACGACTATGTCAAGGTGATGACCGACAGCGGCCCGGGCACCGCGACCGAGACGCTGACCGCCTATGCCGGCACGATCTATTTCAAGAACGCCGATTTCCCCTATGCCTCGACGCTGGCTCTGCTGACGCTGATCCTGGTGATCGCGACCTCGAGCCTGTTCATCAAGATTTTCAGGGTGAAATTCTGA
PROTEIN sequence
Length: 306
MTSAVTTAPRTRAFALPRFLTSEHPFPWLAPITAMLLVFGVYPLLYALWLSLQKRNPVTRISVFNPTWNWSKIFADERVWGAVGRTFAYTGTAIVIELVLGLLIALLLDSDRRGYAILRALMTLPLVVPPAVTGMMFLLMLDGTFGVISRGLYASGLWSADHPILATGSVALLGILLADVWQWTPFMVLIMLAGLRALPREPYEAAAIDGASAVQAFFRLTLPMLSKIIAIAVLIRGVDLFRIYDYVKVMTDSGPGTATETLTAYAGTIYFKNADFPYASTLALLTLILVIATSSLFIKIFRVKF*