ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_150155_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5839..7362

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FA03_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 512.0
  • Bit_score: 695
  • Evalue 3.20e-197
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44196.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 510.0
  • Bit_score: 894
  • Evalue 5.10e-257
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 510.0
  • Bit_score: 691
  • Evalue 1.70e-196

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1524
ATGAGTTTCAAGAGGTTCGACAAGCAGACCTTCATCGTCGACAGCGCCAACGCCTATACCGAGCGGCGCATCTCCAAGCGTGAGTTCCTGCGCCGCATGGGCCTGGCCGGCATCGGCTTCTCCGCCTTCGGCCTCGGCATGCTCGGCGGCCATCGTCGCGGCTTCACCGGCTTCGGCCTCGGCGAGAGCGCCTATGCCGAAGGCCTGCCCGACAGCCAGGCCAAGTGGCTGAAGGAGGTCGGGTCCAAGTTCAAGGGCGCCAAGATCCGCTACACCACCGAGGCGACGCCGCCCTCCGTGGTGCTGAACCAGATCAAGAAGGAGTTCACCGATCCCACCGGCATCGAGGTGGAGGTCGAGATCGTGCCGCTGGAGCAGGTGCTGGCCAAGGCGACGCAGGACGTGCAGGGCCAGCTCGGCACCTACGACCTCTACTATCTCGACCAGTCCTGGGTCTCGACCTTCGCGCCGGACTGCGTCAACCCGATCGAGTACTACAAGGACAAGCCCGAGCTGGCGATGCCCGACTTCGACTGGGACGACTTCTCCAAGCCGCTGGTCGACGGCGTGGCCCAGGTCGACGGCCAGTGGATGGGCATTCCCTTTGACATCCCGATCTTCATCCTGATGTACCGCAAGGACCTCCTGGAGAAGCACGGCATCAAGGTGCCCACCACCTATGACGAGTTCACCGCCGCGGTGAAGGCGATCACCGAGGCGGAGAAGGCCAACGGCATCTTCGGCACCGGCCTGCAGGCCAAGTCCGGCCACTACTCGCTGGAATGCGACTGGACCCAGGCCGTCTGGGGCCATGGCGGCTCGGTGTTCGGCAAGGACAAGAAGTTCGCCGGCAACGACGCGCAGGGCATCGAGGGCCTGAAATGGTACCAGGACCTCCTGAAGATGGCGCCGCCGAACTCGACCGCTTCCACCTGGGACGGCCAGTTCCAGATGATGGTGTCGGGTCAGGTCGCCCTGGTGCAGAGCTGGGACGAGTTCTTCCCCGGCCTCGACGCCGACGATTCCAAGGTCAAGGGCCTGTGGGAGCCGATGCGGCCGCTCACCCCCAAGGCGCTGCGCGCCGCGGCCGATTGCGGCTTCAACGAGAAGCCCAATGCCGGCCACCAGGGCGGCTCGTCGATCTCGCTGTCGAAATATTCCAAGAACCCGGAGGCGGCCTGGATCTTCATGCAGTGGGGCTGCTGCAAGGAGATCATGACCCGCTGCACCCTGGCCGGCGGCTTTGCGCCGATGCGCAATTCCTCCTTCGCCGACGAGCGGGTCAAGGCCAAGGCGAAGGTCGGGCCCGGCACCACCCGCCACCTCGAGGTGGTCAAGTGGACCATCGACAACGTCATCGCCACCGAGCCGCATATGCCGCTCTGGGCCGGCCTCTCCACCAACGAGATCCCGACCGAGCTCGGCAAGCTGATCACCGGCCAGGATTATGGCGGCGATGCCAAGAAGTGCATGGACGCGATCGCCGCCATGGTCGACGCCAAGGTCAAGGACGCCGACCTTTGA
PROTEIN sequence
Length: 508
MSFKRFDKQTFIVDSANAYTERRISKREFLRRMGLAGIGFSAFGLGMLGGHRRGFTGFGLGESAYAEGLPDSQAKWLKEVGSKFKGAKIRYTTEATPPSVVLNQIKKEFTDPTGIEVEVEIVPLEQVLAKATQDVQGQLGTYDLYYLDQSWVSTFAPDCVNPIEYYKDKPELAMPDFDWDDFSKPLVDGVAQVDGQWMGIPFDIPIFILMYRKDLLEKHGIKVPTTYDEFTAAVKAITEAEKANGIFGTGLQAKSGHYSLECDWTQAVWGHGGSVFGKDKKFAGNDAQGIEGLKWYQDLLKMAPPNSTASTWDGQFQMMVSGQVALVQSWDEFFPGLDADDSKVKGLWEPMRPLTPKALRAAADCGFNEKPNAGHQGGSSISLSKYSKNPEAAWIFMQWGCCKEIMTRCTLAGGFAPMRNSSFADERVKAKAKVGPGTTRHLEVVKWTIDNVIATEPHMPLWAGLSTNEIPTELGKLITGQDYGGDAKKCMDAIAAMVDAKVKDADL*