ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_150155_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(14321..14731)

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Pantoea sp. GM01 RepID=J2UIV3_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 129.0
  • Bit_score: 196
  • Evalue 1.30e-47
Putative membrane protein {ECO:0000313|EMBL:EJL91382.1}; TaxID=1144320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. GM01.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 129.0
  • Bit_score: 196
  • Evalue 1.80e-47
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 132.0
  • Bit_score: 184
  • Evalue 1.80e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pantoea sp. GM01 → Pantoea → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGATCGACGACAAGACCGCCCCTTATGCCGCGCTCGTGCTGCGCATCAGCCTCGGCATCCTGTTCCTGGCCCATGCCTGGCTGAAGATCTTCGTGTTCACCCCGGCCGGCACGGCCGGCTTCTTCGAGAGCCTCGGCCTGCCCGGCGCCCTCGCCTATCTCACGATGGCGGTGGAGGTGCTGGGCGCCATCGCCCTCATCATCGGCTTCCAGACCCGCATCGTCGCCCCGATCCTGGCGATCGTCCTCGTCGGCGCCATCGCCACCGTGCACGGCAAGGCCGGCTTCTTCTTCACCAACCCGAACGGCGGCTGGGAGTATCCGGCCTTCTGGGCCATCGCCCTGATCGTGCAGGCCCTGCTCGGGGACGGCGCCCTGGCGCTGAAGTCCGGGAAGGCCCAGACTGCGTGA
PROTEIN sequence
Length: 137
MIDDKTAPYAALVLRISLGILFLAHAWLKIFVFTPAGTAGFFESLGLPGALAYLTMAVEVLGAIALIIGFQTRIVAPILAIVLVGAIATVHGKAGFFFTNPNGGWEYPAFWAIALIVQALLGDGALALKSGKAQTA*