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berkeley_reactor_200306_biofilm_scaffold_150415_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(18656..19915)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, periplasmic component n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SQF6_HAHCH similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 425.0
  • Bit_score: 603
  • Evalue 1.40e-169
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKD58041.1}; TaxID=1581149 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia sp. AD028.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 420.0
  • Bit_score: 604
  • Evalue 6.60e-170
sugar ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 425.0
  • Bit_score: 603
  • Evalue 3.90e-170

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Taxonomy

Grimontia sp. AD028 → Grimontia → Vibrionales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGTTTCGCCGCCTGCTGCTTGCCGCTACAGCCACCATCGCCATGACCGGCCTCGCCCATGCGGCGGAGATCGGCATCTCCTGCGGCGCCGTCGGCCAGGAACTGGCCCTGTGCAAGGAGGGAGCCGAAGCCTGGGCCAAGAAGACCGGCAATAGCGTCAAGATCATCTCGACGCCCAACGACACCAACGAGCGCCTGGCGCTCTACCAGCAGCTGCTCTCGGCCGGCGCCGGCGACATCGACGTGTTCCAGGTCGACGTGATCTGGCCGGGCATCCTCGGCAATCATTTCATCGATCTCGCCCCCTATTCCAAGGGCGCGGAGAAGGCGCATTTCCCGGCCATCATCGACAACAACACCATCGACGGCAAGCTGCTCGCCATGCCGTGGTTCACCGATGCCGGCGTGCTCTACTATCGCAAGGACCTCCTGGAAAAATACGGCCTGCAGCCGCCGGCCACCTGGCAGGAGCTGACCGAGGCCGCCACCAAGATCCAGGACGGCGAGAGGAAGGCCGGCAACGACAAGTTCTTCGGCTTCGTGTTCCAGGGCAGGGCCTATGAGGGCCTGACCTGCGATGCCCTGGAGTGGATCGACAGCTTCGGCGGCGGCGCCATCGTCGACGGCGCCGGCAAGATCACCATCAACAATCCGAAGGCGGTGGAGGCCCTGACGCTGGCGGCAAGCTGGATCGGCAAGATCACGCCGGACGGCGTCCTGAACTATGGCGAGGAGGAAGCGCGCGGCGTCTTCCAGAGCGGCAATGCCGCCTTCATGCGCAACTGGCCCTATGCCTGGTCGCTGGCCAACAACGCGGATTCGCCGATCAAGGACAAGGTCGGCGTCTCGGCCCTGCCCAAGGGCGGCGCCGACGGCAAGAACACCGGCACGCTCGGCGGCTGGCAGCTGGCCGTGTCGAAATATTCGAAGAACCAGGACGCGGCGGCCGATCTGGTCATGTACCTGACCTCGAAGGAGGAGCAGAAGCGCCGCGCCATCGCCGGATCCTACAACCCGACGATCGCCGCGCTCTACGAGGACCCGGACGTGCTGAAGGCGGTGCCGTTCTTCGGCAGCCTCAAGGCGACCTTCACCAGCGCGGTGGCCCGTCCCTCCAAGATCACCGGCGACAAGTACAACAAGGTTTCCAACGCCTTCTGGAACGCGGTGCACACCGTGCTTTCGGGCAAGGCACAGGCGGACGCCTCGCTCGCCTCGCTGGACGGCGAGCTGAAGAGGATCAAGCGCAACAAGTGGTAG
PROTEIN sequence
Length: 420
MFRRLLLAATATIAMTGLAHAAEIGISCGAVGQELALCKEGAEAWAKKTGNSVKIISTPNDTNERLALYQQLLSAGAGDIDVFQVDVIWPGILGNHFIDLAPYSKGAEKAHFPAIIDNNTIDGKLLAMPWFTDAGVLYYRKDLLEKYGLQPPATWQELTEAATKIQDGERKAGNDKFFGFVFQGRAYEGLTCDALEWIDSFGGGAIVDGAGKITINNPKAVEALTLAASWIGKITPDGVLNYGEEEARGVFQSGNAAFMRNWPYAWSLANNADSPIKDKVGVSALPKGGADGKNTGTLGGWQLAVSKYSKNQDAAADLVMYLTSKEEQKRRAIAGSYNPTIAALYEDPDVLKAVPFFGSLKATFTSAVARPSKITGDKYNKVSNAFWNAVHTVLSGKAQADASLASLDGELKRIKRNKW*