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berkeley_reactor_200306_biofilm_scaffold_154241_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(2002..2268)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly PilZ n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y4E6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 79.0
  • Bit_score: 56
  • Evalue 1.00e-05
type IV pilus assembly PilZ similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 54.0
  • Bit_score: 56
  • Evalue 3.70e-06
Type IV pilus assembly PilZ {ECO:0000313|EMBL:EMS41736.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.4
  • Coverage: 79.0
  • Bit_score: 56
  • Evalue 1.40e-05

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Taxonomy

Methylobacterium mesophilicum → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGAAGAGCGCCAAGATCACCTTCGGCGACTTCATCTTCGCCCGGGATTGCACGGTCCGCGACATCTCCGCCAGCGGCGCCCGCGTCACGGTGACGGGCGCCAACGAGATCCCGAACGAATTCTATCTGGTGATGATGACCAATCGCATGATGCACAGGGCGCATGTCGCCTGGCGCAAGGGCGACACGCTGGGCGTGACCTTCGAGGGCGAGGCGGAGAACATCGCCAGGAGCGACGACCCCCGCCTGCGTCAGTTCAAGGCTTGA
PROTEIN sequence
Length: 89
MKSAKITFGDFIFARDCTVRDISASGARVTVTGANEIPNEFYLVMMTNRMMHRAHVAWRKGDTLGVTFEGEAENIARSDDPRLRQFKA*