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berkeley_reactor_200306_biofilm_scaffold_154241_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 15254..16090

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain protein TIM barrel n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FI37_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 278.0
  • Bit_score: 428
  • Evalue 3.10e-117
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CCV15996.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 278.0
  • Bit_score: 428
  • Evalue 4.30e-117
xylose isomerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 277.0
  • Bit_score: 362
  • Evalue 5.90e-98

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Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
GTGAAATACGCCTTCAACACCTGGGCCTATGGCAGCTTTCCCAGCTGGCTGCCCTCCTATCCCCTGGACGAGGTGGTGCGGCGCCTCGCCCGCATCGGCTATGACGGCATCGAGATCGGCTGCGCCGCCCCCCATGCCTGGCCGGCCTATCTGCCGGCCGCCCGGAGGGCCGAGCTGCGCCGCCTGATGCAGGGCGAGGGCCTGCCGGCGGTCAGCCTGCTGCCGGCTCCCGGCGGCGGTCCCGGCTTCAACGCCGCCTCGCCCGTGGCCGAGGAGCGGCAGGGCACCGTCGCCCATTACAAGGAGGTGGTGGACCTTGCCGCCGATCTCGGCGCCGGCATCGTGCTCTACATCGCCGGCTGGCAGGTGTTCGGCACCGGCCGGCGCGATGCCTGGGCCTGGAGCACGCAGGCCCTCACCGAGATCGGCCGCCATGCCCGCGAGCGCGGCATCATCGTGGCGATCGAGCCGACCGCGGCCGACAGCAACCTGGTCGAGACCGCCGACGACGCCCTGGAGATGATGCGCGAGACCGGCCTGCCCAACGTCAAGGTGATGTTCGACACCTATCACGCCCTCTACCGCAACGAGGTGGCGGCCGACTATATCCGCCAGATGGGCGCAGACCTCGCCCATATCCATTTCGCCGACACCGATCGGGGCGCGCCGGGAGACGGCACGGTCGACTGGACCGGCGTGATGCAGGCGGTCAGGGATGCCGGCTTCGCCGGCCACCTCACCATGGAGATCGGCTTCCACACGCGCAAGGCCGATCCCGACCACTATGCCCGCCGGGCGCTCGCCTATTGCAAGGCGATCGAAGCGTCGCTGGGCTGA
PROTEIN sequence
Length: 279
VKYAFNTWAYGSFPSWLPSYPLDEVVRRLARIGYDGIEIGCAAPHAWPAYLPAARRAELRRLMQGEGLPAVSLLPAPGGGPGFNAASPVAEERQGTVAHYKEVVDLAADLGAGIVLYIAGWQVFGTGRRDAWAWSTQALTEIGRHARERGIIVAIEPTAADSNLVETADDALEMMRETGLPNVKVMFDTYHALYRNEVAADYIRQMGADLAHIHFADTDRGAPGDGTVDWTGVMQAVRDAGFAGHLTMEIGFHTRKADPDHYARRALAYCKAIEASLG*