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berkeley_reactor_200306_biofilm_scaffold_117554_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Leifsonia_70_12

near complete RP 42 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 11 / 38
Location: 23643..24698

Top 3 Functional Annotations

Value Algorithm Source
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85) similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 357.0
  • Bit_score: 620
  • Evalue 2.00e-175
3-isopropylmalate dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQT0_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 351.0
  • Bit_score: 632
  • Evalue 1.40e-178
Putative 3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:ERK70934.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 351.0
  • Bit_score: 632
  • Evalue 1.90e-178

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Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGAGCACAACCGTCCAACTCGCCGTCATCCCCGGGGACGGAATCGGTCCGGAGGTGATCGCGGAGGCGGTCAAGGTGCTCGATGCGGTTACCGCGGGCAGCGACCTCGCGTTCGAGAAGACGTACTTCTCGCTCGGCGCCGACCGGTACCTCGCCACGGGCGACGTGCTCACGGACGACGACCTGGCCGCGATCGCCGGCCACGACGCGATCCTGCTCGGCGCCGTCGGCGGCACGCCGGGCGACCCGCGGCTGGCCGGCGCCAACATCGAGCGCGGGCTGCTGCTGAAGCTGCGCTTCTCGCTCGACCACTACGTCAACCTCCGCCCGACCACGCTGTTCCCCGGCATCGCGAGCCCGCTCGCGAACCCGGGAGACGTCGACTTCGTGGTCGTGCGCGAGGGCACGGAGGGGCCGTACGTCGGCAACGGCGGCGCCATTCGGCAGGGCACGCCGCACGAGATCGCCAACGAGGTCTCCGTCAACACGGCGTACGGCGTGGAGCGGGTGGTCCGCTACGCCTTCGAGCAGGCCGAGCAGCGCCGCAAGAAGCTGACCCTCGTGCACAAGACCAACGTGCTGACCTTCTCGGGAGGCCTCTGGAAGCGGATCGTCGACGCAGTCGCCGCCGAGCACCCCGACGTCGCCGTCGACTACCTTCACGTCGACGCGGCGACGATCTTCCTGGTCACGAATCCTGCTAGATTCGATGTGATCGTCACGGACAACCTCTTCGGCGACATCCTCACCGACCTCGCGGCCGCGATCAGCGGCGGCATCGGACTGGCCGCCTCGGGCAACCTCAACCCCGCAGGCGAGTTCCCGAGCATGTTCGAACCGGTTCACGGATCGGCCCCCGACATCGCCGGCCAGCAGAAGGCCGACCCCACCGCCGCGATCCTCTCCGTCGCTCTCCTCCTGCGCCACCTCGGCGCCAGGGAGCTCGCGGAGCGCGTCGAGCAGGCGGTGACGTCCGACCTGGCCGCCCGCAGCGGCGACGCACGCACGACCTCCAAGATCGGCGACGCGATCGCGGCCCGCGTGGCGCAGAATTGA
PROTEIN sequence
Length: 352
MSTTVQLAVIPGDGIGPEVIAEAVKVLDAVTAGSDLAFEKTYFSLGADRYLATGDVLTDDDLAAIAGHDAILLGAVGGTPGDPRLAGANIERGLLLKLRFSLDHYVNLRPTTLFPGIASPLANPGDVDFVVVREGTEGPYVGNGGAIRQGTPHEIANEVSVNTAYGVERVVRYAFEQAEQRRKKLTLVHKTNVLTFSGGLWKRIVDAVAAEHPDVAVDYLHVDAATIFLVTNPARFDVIVTDNLFGDILTDLAAAISGGIGLAASGNLNPAGEFPSMFEPVHGSAPDIAGQQKADPTAAILSVALLLRHLGARELAERVEQAVTSDLAARSGDARTTSKIGDAIAARVAQN*