ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_117554_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Leifsonia_70_12

near complete RP 42 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 11 / 38
Location: 27103..28068

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B56600 similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 302.0
  • Bit_score: 391
  • Evalue 4.80e-106
LysR family transcriptional regulator {ECO:0000313|EMBL:KFF59872.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 309.0
  • Bit_score: 374
  • Evalue 8.50e-101
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 302.0
  • Bit_score: 333
  • Evalue 5.70e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cryobacterium sp. MLB-32 → Cryobacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGCATTCTGGTTATGATTCGGGAATGCTGCTCGACGACCTCGACTCCCACAGCCTCCGCGTCGTGCGCGCCATCGCCGACCTCGGTTCGATCACGCGTGCGGCGGAATCGCTCGGCTACAGCCAGCCGGCGATCAGTCAGCACCTGCGCCGGCTGGAGGGCCGGATCGGGATGCCCCTGGTCGCCCGCGCCGGCCGGGGCGTGCGCCTCACGGAGGCCGGGCGCGTGCTCGCGCGTCACGCGAGGGCGGTCACCACAGCCCTGGACGCCGCTGCGGGCGAGCTCGCCGACCTCCGCGGCCTGCGGACCGGCCGGGTGCGACTCGCCGGTTTCCCCTCCGCGTCCTCGTCGCTCGTTCCCCGGCTGCTCAGCACCATGGAGGCCGAGCATCCCGGCGTGCGCATCACCTATCTGGAGGCCGAGCCGCCCGAGGCCGTCGCCGCCGTGCGCGGGCAGAGCGCCGACCTTGCGATCACGTTCAGCTACCCGGGCGATCGTGCCGACCCGCACCGCGAGAGCACCAGGGGTCTCGCGGTCGTTCCGCTCTGGAAGGACGAGATGCTCGTCGCCCTCCCGGCAGGCCATCCGCTGGCGCAGGCCGACCGGGTCGACCTCGCCGGGCTGGCCGCCGAATCGTGGATCGGCGGTTGCCCGCGCTGCCGCGGCCACCTGCTGGAGCTGGCGGACGCGTGCGGGTACGCGCCGCGCATCGCCTACGAGACCGACAACTTCATCGCGGTGCTGCGGATGGTCGCCGAAGGGGTCGGAGTCGCGCTGCTCCCCGCACTCGCGGCCGGGTCGGCGGGCTCCGTTCCCGGGGTGGTGCTGCGGCCGACCGCCAACCGCGACCACCGCACGATCAACCTGGTCGGGGCCTCGGGCTCCGACGCGGTGCCGGCGATCGCCGCGACGGCTGACGCGCTGCTCGCCCTCGACGGTGGTGCCTGGGGGCTGTCCGGGCTCTGA
PROTEIN sequence
Length: 322
MHSGYDSGMLLDDLDSHSLRVVRAIADLGSITRAAESLGYSQPAISQHLRRLEGRIGMPLVARAGRGVRLTEAGRVLARHARAVTTALDAAAGELADLRGLRTGRVRLAGFPSASSSLVPRLLSTMEAEHPGVRITYLEAEPPEAVAAVRGQSADLAITFSYPGDRADPHRESTRGLAVVPLWKDEMLVALPAGHPLAQADRVDLAGLAAESWIGGCPRCRGHLLELADACGYAPRIAYETDNFIAVLRMVAEGVGVALLPALAAGSAGSVPGVVLRPTANRDHRTINLVGASGSDAVPAIAATADALLALDGGAWGLSGL*