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berkeley_reactor_200306_biofilm_scaffold_117554_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Leifsonia_70_12

near complete RP 42 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 11 / 38
Location: comp(32234..32680)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RK43_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 141.0
  • Bit_score: 144
  • Evalue 6.20e-32
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERK69271.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 141.0
  • Bit_score: 144
  • Evalue 8.60e-32
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 136.0
  • Bit_score: 108
  • Evalue 1.40e-21

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Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGACGATCCCCGCGCTCCCGGACGACTCCGACCCGATCGCCCGCGTGCAGCGCGAGCTCCTCACGGTCGGCCGGCGCGGCACCGCGCGCGTGCGGCGGGAGGACGAGGCGCTCTCGGTGGTCGACCGCTCACTGCTCACCTACATCCAGGACAATCCCGGCTGCCGCGCGGTCGACATCGCGGCGCACTTCCAGCTCAACCGCTCGACGGTCTCGCGCCAGCTCGGCGCGCTCCTCGACCACGGCTACGTGAGCGCCGACGAGGAGCCGCCGGGAGGCCCGCGGGGCATCGCGCTGCGACTCACCGATGCCGGCAGCGCCGCCTTCCACCAGTCGACGCGCACCGTGCTGGACTCGGTGGCCCGGCGCCTGGAGGGCTGGTCGCAGGGCGACCTGGAGGCTTTCGCCCGCATGCTGGAGCGCTACAACTCGGCTCCGGACGAGTGA
PROTEIN sequence
Length: 149
MTIPALPDDSDPIARVQRELLTVGRRGTARVRREDEALSVVDRSLLTYIQDNPGCRAVDIAAHFQLNRSTVSRQLGALLDHGYVSADEEPPGGPRGIALRLTDAGSAAFHQSTRTVLDSVARRLEGWSQGDLEAFARMLERYNSAPDE*