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berkeley_reactor_200306_planktonic_scaffold_2164

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_2164_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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486..2777
DNA (2292bp) protein (764aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Primosomal protein N n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQS6_SINAD
primosomal protein N''
berkeley_reactor_200306_planktonic_scaffold_2164_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3302..3940
DNA (639bp) protein (213aa)
PEP-CTERM putative exosortase interaction domain-containing protein n=2 Tax=Singulisphaera acidiphila RepID=L0DQR6_SINAD
exosortase interaction domain-containing protein
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGA31328.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3956..4834
DNA (879bp) protein (293aa)
PEP-CTERM putative exosortase interaction domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMP0_SINAD
exosortase interaction domain-containing protein
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGA29926.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_4
unknown

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4846..5439
DNA (594bp) protein (198aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_2164_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5672..6283
DNA (612bp) protein (204aa)
PEP-CTERM putative exosortase interaction domain-containing protein n=2 Tax=Singulisphaera acidiphila RepID=L0DSF1_SINAD
exosortase interaction domain-containing protein
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGA31326.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6465..7061
DNA (597bp) protein (199aa)
PEP-CTERM putative exosortase interaction domain-containing protein n=2 Tax=Singulisphaera acidiphila RepID=L0DSF1_SINAD
exosortase interaction domain-containing protein
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGA31326.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7308..7973
DNA (666bp) protein (222aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQU8_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA31360.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7957..11685
DNA (3729bp) protein (1243aa)
WD domain, G-beta repeat-containing protein,protein kinase family protein n=2 Tax=Singulisphaera acidiphila RepID=L0DSL6_SINAD
WD domain, G-beta repeat-containing protein,protein kinase family protein {ECO:0000313|EMBL:AGA31361.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
WD domain, G-beta repeat-containing protein,protein kinase family protein
berkeley_reactor_200306_planktonic_scaffold_2164_9
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11866..12195
DNA (330bp) protein (110aa)
Cation/cationic drug transporter n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUZ4_9RHIZ
small multidrug resistance protein
Tax=BJP_IG2103_Dechloromonas_63_51
berkeley_reactor_200306_planktonic_scaffold_2164_10
unknown

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12315..13505
DNA (1191bp) protein (397aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_2164_11
unknown

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comp(13567..14880)
DNA (1314bp) protein (438aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_2164_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15083..16912
DNA (1830bp) protein (610aa)
Putative carbamoyl transferase, NodU family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR40_SINAD
carbamoyl transferase, NodU family
Putative carbamoyl transferase, NodU family {ECO:0000313|EMBL:AGA31470.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16928..17344
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DSY2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31471.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17383..17586
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR71_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31472.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_15
unknown

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18024..19373
DNA (1350bp) protein (450aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_2164_16
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(19403..20557)
DNA (1155bp) protein (385aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B3F5_HERA2
response regulator receiver modulated metal dependent phosphohydrolase
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:ABX04118.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
berkeley_reactor_200306_planktonic_scaffold_2164_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21762..22853)
DNA (1092bp) protein (364aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGF5_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA27873.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_18
unknown

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comp(22933..23304)
DNA (372bp) protein (124aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_2164_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23342..24730)
DNA (1389bp) protein (463aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Singulisphaera acidiphila RepID=L0D7N8_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA24666.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25227..25943
DNA (717bp) protein (239aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE50_SINAD
antimicrobial peptide ABC transporter ATPase
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGA27659.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_21
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25969..27513
DNA (1545bp) protein (515aa)
ABC-type transport system, involved in lipoprotein release, permease component n=2 Tax=Singulisphaera acidiphila RepID=L0DFR2_SINAD
lipoprotein release ABC transporter permease
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AGA27658.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_2164_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27676..29688)
DNA (2013bp) protein (671aa)
Peroxiredoxin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGP5_SINAD
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGA27978.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 22 items

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